SecReT4
Protein ID: 294011982
T4SS name [ID]Trb [310]
Gene symbolvirB4
Locus tagSJA_C1-19960
StrainSphingobium japonicum UT26S
Repliconchromosome 1 [GenBank: NC_014006] [Browse all T4SS(s) in this replicon]
Location [Strand]1992757..1995195 [-]
Producttype IV secretory pathway VirB4 component
Component typeTrbE
UniProt IDD4Z2J8
KEGG IDsjp:SJA_C1-19960
PDB IDNA
Domain hit(s) vs Pfam AAA_10 [PF12846], Evalue: 9.6e-34, Aligned region: 442..723
CagE_TrbE_VirB [PF03135], Evalue: 4e-15, Aligned region: 181..388
Protein Sequence: 812 a.a.     [Download]
>gi|294011982|ref|YP_003545442.1| type IV secretory pathway VirB4 component [Sphingobium japonicum UT26S]
MMNLAEYRNKNSRLADFLPWVALVSAGVVLNKDGSFQRTARFRGPDLDSAVPAELVAVAGRLNNAFRRLG
SGWAIFVEAQRHAAATYPASIFPDAASALVDAERKADFEEAGAHFESSYFLTFTYLPPAEDAARAESWLY
EGREKVGLDPRETLTGFADRTDRILRLVEAFMPECAWLSDSETLTYLHGCVSTKRHRVRVPETPIYLDAL
LADQPLTGGLEPRLGASHLRVLTITGFPTATTPGLLDDLNRLAFPYRWSTRAILLDKTDATKLLTKIRRQ
WFAKRKSVAAILKEVMTNEASILVDTDASNKAADADLALQELGADYAGIAYVTATVMVWDADPRTADEKL
RLVEKTIQGRDFTAMAETINAADAWLGSLPGHVYANVRQPPISTLNLAHMIPLSAVWAGPERDEHFGSPP
LLFGKTEGSTPFRFSLHVGDVGHTLIVGPTGAGKSVLLALMALQFRRYPGSQIFAFDFGGSIRAAALAMR
GDWHDLGGGLTEGSETSVSLQPLARVEATAERAWAADWIIAILAREGVAITPEVKEHIWTALTSLASAPV
EERTITGLCVLLQSNDLKQALRPYCIGGAWGRLLDAENEHLGTATVQAFETEGLIGTEAAPAVLAYLFHR
IEDRLDGSPTLIIVDEGWLALDDEGFAGQLREWLKTLRKKNASVIFATQSLSDIDGSAIAPAIIESCQTR
LLLPNERAIEPQITTIYRRFGLNDRQIEILARAMPKRDYYCQSRRGNRLFELGLSEVALALCAASSKADQ
ATIARIIADHGPDNFLDAWLRQRGVGWAADLTANLTNLEKPS
 
Nucleotide Sequence: 2439 bp     [Download]
>gi|294009986|ref|NC_014006.1|:c1995195-1992757 Sphingobium japonicum UT26S chromosome 1, complete genome
ATGATGAACCTTGCCGAATATCGCAACAAGAACAGCCGGCTCGCCGACTTCTTGCCCTGGGTCGCACTAG
TCAGCGCGGGCGTCGTGCTCAACAAGGACGGCAGCTTCCAACGCACGGCCCGTTTCCGTGGCCCGGATCT
CGACAGCGCTGTTCCGGCCGAACTGGTCGCCGTCGCCGGTCGCCTCAACAACGCCTTCCGTCGTCTCGGC
TCCGGCTGGGCGATCTTCGTCGAAGCACAGCGCCATGCCGCCGCGACCTATCCGGCCAGCATTTTCCCCG
ACGCCGCATCGGCGCTGGTGGATGCCGAACGCAAGGCGGATTTCGAGGAAGCGGGCGCGCATTTCGAGTC
GAGCTACTTCCTGACCTTCACCTATCTGCCGCCGGCCGAGGATGCCGCGCGCGCGGAAAGCTGGCTCTAT
GAGGGGCGGGAGAAGGTCGGACTTGATCCGCGCGAGACGCTGACCGGCTTTGCTGATCGCACCGACCGCA
TCCTCCGGCTGGTCGAAGCCTTCATGCCGGAATGCGCCTGGCTGTCGGACAGCGAAACGCTGACCTATCT
GCACGGCTGCGTCTCGACCAAACGGCACCGCGTCCGCGTTCCTGAAACGCCCATATATCTCGATGCACTG
CTGGCCGATCAGCCTCTCACCGGAGGGTTGGAACCACGATTGGGTGCGTCGCATCTGCGCGTCCTGACGA
TCACCGGTTTTCCAACCGCGACGACGCCAGGGTTGCTCGACGATCTGAATCGCCTGGCCTTTCCGTATCG
CTGGTCAACGCGCGCGATCCTCCTCGACAAGACCGACGCGACAAAGCTGCTGACAAAGATCAGGCGGCAA
TGGTTCGCCAAGCGCAAGAGCGTCGCCGCGATCCTGAAGGAGGTGATGACCAACGAGGCATCCATCCTCG
TGGATACGGATGCGTCGAACAAGGCGGCGGATGCGGACCTCGCGCTTCAGGAGTTGGGCGCCGATTATGC
CGGGATCGCCTATGTCACCGCGACGGTGATGGTGTGGGACGCCGATCCGCGCACGGCCGACGAAAAGCTG
CGACTGGTCGAGAAGACCATCCAGGGCCGCGATTTCACCGCGATGGCGGAGACCATCAACGCGGCCGATG
CCTGGCTCGGCAGCCTGCCAGGTCACGTCTACGCCAATGTCCGGCAGCCCCCCATCAGCACATTGAATCT
CGCCCACATGATTCCCCTATCCGCCGTGTGGGCGGGGCCGGAACGGGATGAGCACTTCGGGTCGCCCCCC
TTGCTGTTCGGCAAGACCGAGGGAAGCACCCCGTTCCGGTTTTCTCTTCATGTCGGCGATGTCGGCCATA
CGCTGATCGTCGGCCCGACCGGCGCGGGCAAGTCCGTGCTGTTGGCGCTAATGGCGCTTCAGTTCCGGCG
CTATCCCGGATCGCAAATCTTCGCTTTCGATTTCGGCGGCTCGATCCGCGCAGCCGCGCTCGCCATGCGC
GGCGACTGGCATGATCTGGGCGGTGGACTGACGGAGGGCTCGGAAACGTCCGTCAGCCTTCAACCGCTCG
CCCGCGTTGAGGCAACGGCCGAACGCGCCTGGGCGGCCGACTGGATCATCGCCATCCTTGCCCGCGAAGG
CGTTGCCATCACGCCCGAGGTGAAGGAGCACATCTGGACAGCGCTGACATCCCTGGCCTCCGCTCCGGTT
GAAGAGCGCACTATCACCGGCCTCTGTGTCCTGCTCCAATCTAATGACTTGAAGCAGGCGCTGCGCCCCT
ATTGCATCGGTGGTGCATGGGGGCGGTTGCTCGACGCCGAGAATGAACATCTCGGCACGGCGACGGTCCA
GGCGTTCGAGACGGAGGGGCTGATCGGCACCGAGGCCGCGCCCGCCGTGCTCGCCTATCTCTTTCACCGG
ATCGAAGATCGACTCGACGGATCGCCCACGCTCATCATCGTCGATGAAGGCTGGCTCGCGCTGGACGATG
AGGGGTTCGCCGGCCAGCTCCGCGAGTGGCTGAAGACGCTGCGCAAGAAGAACGCCTCCGTCATCTTCGC
TACTCAATCGCTGTCGGACATCGACGGCAGCGCCATCGCGCCTGCCATCATCGAGAGCTGCCAGACCCGG
CTCCTATTGCCGAACGAGCGAGCGATCGAGCCGCAGATCACAACCATCTATCGCCGCTTCGGTCTCAATG
ATCGCCAGATCGAGATCCTCGCGAGGGCCATGCCCAAGCGCGACTACTACTGCCAGTCCCGGCGCGGCAA
CCGGCTGTTCGAGTTAGGCCTGTCCGAGGTGGCGCTGGCGCTCTGCGCGGCCTCTTCCAAAGCCGACCAG
GCCACTATCGCCCGCATCATCGCCGATCACGGGCCTGACAACTTCCTCGACGCCTGGTTACGCCAGCGCG
GCGTGGGCTGGGCGGCCGATCTAACTGCCAACCTCACCAACCTGGAGAAACCCTCATGA