| Protein ID: 253801055 |
 T4SS name [ID] | Tra_F [109] |
| Gene symbol | traD |
| Locus tag | pVir_81 |
| Strain | Escherichia coli Vir68 plasmid pVir68 (NC_012944) |
| Replicon | plasmid pVir68 [GenBank: NC_012944] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 80156..82309 [+] |
| Product | conjugal transfer protein TraD |
| Component type | TraD_F |
| UniProt ID | C5ZZM5 |
| KEGG ID | NA |
| PDB ID | NA |
| Domain hit(s) vs Pfam | TrwB_AAD_bind [PF10412], Evalue: 2.9e-148, Aligned region: 172..561 TraD_N [PF12615], Evalue: 5.2e-34, Aligned region: 31..129 TraG-D_C [PF12696], Evalue: 1.1e-18, Aligned region: 419..541 AAA_10 [PF12846], Evalue: 2.2e-10, Aligned region: 187..491 T4SS-DNA_transf [PF02534], Evalue: 9.4e-08, Aligned region: 382..476 |
| Protein Sequence: 717 a.a. [Download] |
| >gi|253801055|ref|YP_003034056.1| conjugal transfer protein TraD [Escherichia coli Vir68] MSFNAKDMTQGGQIASMRIRMFSQIANIILYCLFIFFWILVGLVLWVKISWQTFVNGCIYWWCTTLEGMR DLIRSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCGEQLWSAFVLASVVALVICLITFFVVSWILGRQGKQ QSENEITGGRQLTDNPKEVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYAR QRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQG SGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTFLRNSPAANLVEEKIEKTAISIRAVLTNYVKA IRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRV WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAATLFDVMNTRAFFRSPSHKIA EFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSL KYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAI NDKKSDAGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAVYEAWQREQNPDIQQKMQRREEVN INVHRERGEDVEPGDDF |
| Nucleotide Sequence: 2154 bp [Download] |
| >gi|253800975|ref|NC_012944.1|:80156-82309 Escherichia coli Vir68 plasmid pVir68, complete sequence ATGAGTTTTAACGCAAAGGATATGACCCAGGGCGGTCAGATTGCGTCCATGCGTATCCGCATGTTCAGTC AGATCGCCAATATCATACTTTACTGCCTGTTTATTTTTTTCTGGATCCTAGTTGGTCTGGTTTTATGGGT AAAAATAAGCTGGCAGACGTTTGTGAATGGCTGCATTTACTGGTGGTGCACCACGCTGGAAGGCATGCGG GATTTAATCAGGTCCCAGCCGGTCTATGAGATCCAGTATTACGGCAAAACCTTCCGGATGAACGCGGCTC AGGTACTGCATGATAAATATATGATCTGGTGCGGTGAGCAGTTATGGTCGGCATTCGTTCTGGCGTCTGT CGTGGCCCTGGTTATCTGCCTGATCACCTTCTTTGTTGTCTCCTGGATTCTGGGGCGTCAGGGTAAACAA CAGAGCGAAAATGAAATCACAGGTGGTCGTCAGCTGACTGACAATCCGAAAGAGGTGGCCAGGATGCTGA AAAAAGATGGCAAGGATTCCGATATCCGGATTGGCGATCTGCCGATTATCCGGGATTCTGAAATCCAGAA CTTCTGTCTGCACGGCACTGTCGGGGCCGGTAAGTCGGAGGTTATCCGTCGTCTGGCCAACTACGCCCGT CAGCGTGGTGATATGGTGGTGATTTATGACCGTTCGGGGGAATTTGTTAAAAGTTACTATGATCCCTCCA TCGATAAAATCCTGAATCCGCTGGATGCACGCTGTGCTGCCTGGGATTTGTGGAAGGAGTGCCTGACACA GCCAGATTTTGATAATACCGCAAATACTCTGATCCCGATGGGGACAAAAGAGGACCCGTTCTGGCAGGGT TCAGGACGTACCATTTTTGCGGAAGCGGCATACCTGATGCGTAATGACCCCAACCGCAGCTACAGCAAAC TGGTGGACACACTGCTTTCCATCAAAATTGAAAAGCTGCGTACCTTCCTGCGTAATTCACCGGCGGCCAA CCTGGTGGAAGAGAAAATCGAGAAAACGGCCATATCCATCCGTGCTGTGCTGACCAACTACGTGAAAGCC ATCCGTTACCTGCAGGGGATTGAGCATAACGGTGAGCCCTTCACCATCCGTGACTGGATGCGTGGTGTCC GGGAAGATCAGAAAAACGGCTGGCTGTTTATTTCGTCGAACGCCGACACCCATGCCTCCCTGAAGCCGGT GATCTCCATGTGGCTGTCCATTGCTATTCGTGGTCTGCTGGCAATGGGAGAAAACCGTAACCGTCGTGTG TGGTTTTTCTGTGACGAGTTACCCACGTTACACAAACTGCCGGACCTGGTGGAGATCCTGCCGGAAGCCC GTAAGTTCGGTGGCTGTTATGTGTTTGGTATCCAGTCCTATGCCCAGCTGGAAGATATCTACGGTGAGAA AGCGGCTGCCACGCTGTTTGACGTCATGAACACCCGTGCCTTTTTCCGTTCTCCCAGCCATAAGATTGCA GAGTTCGCTGCCGGTGAAATTGGTGAGAAAGAGCACCTGAAAGCCAGCGAGCAGTATTCCTACGGTGCTG ATCCGGTACGTGACGGGGTATCGACCGGTAAGGATATGGAGCGTCAGACGCTGGTCAGTTATTCCGACAT TCAGTCTCTGCCGGATCTGACCTGTTATGTCACCCTGCCCGGACCGTATCCGGCAGTAAAACTCTCCCTG AAATATCAGACACGACCGAAGGTCGCTCCGGAGTTTATTCCGCGTGACATCAACCCGGAAATGGAGAACC GTCTGAGTGCCGTACTTGCCGCAAGGGAAGCAGAAGGTCGTCAGATGGCCAGCCTCTTCGAACCGGATGT CCCGGAGGTTGTTTCCGGAGAAGACGTGACTCAGGCTGAACAGCCGCAACAGCCGGTGTCTCCTGCCATC AACGATAAGAAGTCAGATGCTGGTGTGAATGTTCCGGCAGGGGGGATCGAGCAGGAGCTGAAAATGAAAC CGGAAGAAGAGATGGAACAGCAACTGCCACCCGGGATCAGTGAATCCGGTGAAGTGGTGGATATGGCCGT TTATGAGGCATGGCAACGGGAGCAGAATCCGGATATCCAGCAGAAGATGCAGCGTCGTGAAGAGGTGAAC ATCAATGTGCACCGGGAGCGCGGGGAGGATGTTGAGCCGGGAGATGATTTCTGA |