| Protein ID: 242347997 |
 T4SS name [ID] | Tra_F [580] |
| Gene symbol | traD |
| Locus tag | pRA1_0060 |
| Strain | Aeromonas hydrophila plasmid pRA1 (NC_012885) |
| Replicon | plasmid pRA1 [GenBank: NC_012885] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 46735..48600 [+] |
| Product | type IV secretion-like conjugation coupling factor TraD |
| Component type | TraD_F |
| UniProt ID | C6GA17 |
| KEGG ID | NA |
| PDB ID | NA |
| Domain hit(s) vs Pfam | AAA_10 [PF12846], Evalue: 9.7e-20, Aligned region: 173..549 TrwB_AAD_bind [PF10412], Evalue: 4.4e-17, Aligned region: 167..266 TrwB_AAD_bind [PF10412], Evalue: 4.4e-17, Aligned region: 469..609 TraG-D_C [PF12696], Evalue: 6.3e-13, Aligned region: 471..595 DUF87 [PF01935], Evalue: 1.1e-06, Aligned region: 173..211 FtsK_SpoIIIE [PF01580], Evalue: 1.2e-05, Aligned region: 168..211 |
| Protein Sequence: 621 a.a. [Download] |
| >gi|242347997|ref|YP_002995558.1| type IV secretion-like conjugation coupling factor TraD [Aeromonas hydrophila] MTMSYDPLAYEMPWRPNYEKNAVAGWIAASCAALAVEQVSTMPSEPFYWMTGICGVMAMARLPKAIKLHL LQKHLKGRDLEFISIAELQKYIKDTPEDMWLGSGFLWENRHAQRVFEILKRDWTSIVGKESTVKKVVRKI QGKKKELPIGQPWIHGVEPKEEKLMQPLKHTEGHSLIVGTTGSGKTRMFDILISQAILRGEAVIIIDPKG DKEMRDNARRACEAMGQPERFVSFHPAFPEESVRIDPLRNFTRVTEIASRLAALIPSEAGADPFKSFGWQ ALNNIAQGLVLTHDRPNLTKLRRFLEGGAAGLVIKAVQAYSERVKPDWEAEAAAYLEKAKNGSREKIAFA LMKFYYDIIQPEHPNSDLEGLLSMFQHDQTHFSKMVANLLPIMNMLTSGELGPLLSPDSSDLSDERQITD SAKIINNAQVAYLGLDSLTDNMVGSAMGSIFLSDLTAVAGDRYNYGVNNRPVNIFVDEAAEVINDPFIQL LNKGRGAKLRLFVATQTFADFAARLGSKDKALQVLGNINNTFALRIVDGETQEYIADNLPKTRLKYVMRT QGQNTDGKEPIMHGGNQGERLMEEEADLFPAQLLGMLPNLEYIAKISGGTIVKGRLPILTQ |
| Nucleotide Sequence: 1866 bp [Download] |
| >gi|242347937|ref|NC_012885.1|:46735-48600 Aeromonas hydrophila plasmid pRA1, complete sequence ATGACAATGAGTTATGACCCGCTCGCCTACGAGATGCCGTGGCGGCCCAACTATGAAAAAAATGCTGTAG CAGGCTGGATTGCAGCTTCTTGTGCTGCTTTGGCCGTAGAGCAAGTCAGCACTATGCCTTCGGAACCCTT CTATTGGATGACCGGGATCTGTGGCGTGATGGCAATGGCTCGTTTGCCCAAGGCTATCAAACTTCACCTG CTCCAAAAGCATTTGAAAGGCCGTGACTTGGAGTTCATTTCCATAGCGGAGCTCCAGAAGTACATCAAGG ACACTCCGGAGGACATGTGGCTTGGTAGTGGATTCCTGTGGGAAAACCGCCATGCTCAGCGCGTTTTTGA AATCCTGAAACGCGACTGGACTTCTATCGTAGGCAAAGAGTCTACGGTCAAGAAGGTTGTCCGGAAGATA CAGGGTAAGAAAAAGGAACTGCCAATCGGACAGCCCTGGATTCACGGGGTAGAGCCAAAAGAAGAGAAGT TGATGCAGCCGCTCAAGCACACCGAGGGGCATTCGCTGATCGTTGGGACCACTGGCTCGGGCAAGACCCG TATGTTCGACATCCTGATTTCGCAGGCCATTCTCCGTGGTGAGGCCGTAATAATCATAGACCCGAAAGGG GATAAAGAGATGCGGGACAATGCTCGACGTGCCTGTGAAGCTATGGGACAGCCGGAAAGGTTCGTCTCAT TTCATCCGGCATTTCCAGAAGAATCGGTGCGTATTGACCCTCTGCGTAACTTCACCCGAGTGACTGAAAT CGCTAGTCGTTTGGCCGCACTGATCCCGTCAGAAGCTGGGGCTGACCCGTTCAAGTCATTTGGCTGGCAG GCACTAAATAACATCGCGCAGGGTTTGGTTCTTACTCATGATCGCCCCAACCTGACAAAGCTCCGCCGCT TCCTTGAGGGAGGTGCTGCTGGCCTGGTTATCAAGGCTGTTCAGGCCTACTCCGAACGAGTGAAACCTGA CTGGGAGGCAGAAGCAGCGGCCTACCTAGAGAAAGCGAAAAACGGTTCGCGTGAGAAGATTGCTTTCGCG TTGATGAAGTTCTACTACGACATCATCCAGCCTGAGCACCCGAACTCTGATCTGGAAGGCTTGCTGTCGA TGTTCCAGCATGACCAAACCCACTTCTCCAAGATGGTGGCGAACCTTCTGCCGATCATGAATATGCTGAC GTCCGGGGAGCTCGGCCCTCTGCTATCCCCAGACTCATCTGATCTGAGTGACGAACGCCAGATCACCGAC TCCGCAAAAATCATCAACAACGCTCAAGTAGCTTATCTGGGTCTCGACTCCCTGACAGACAACATGGTTG GTAGTGCTATGGGGTCCATCTTCCTATCAGATCTGACTGCGGTTGCCGGTGACAGATACAACTACGGCGT CAACAACAGACCCGTAAACATCTTTGTGGATGAGGCTGCTGAGGTGATCAACGACCCATTCATTCAGCTT CTGAACAAAGGTCGCGGTGCGAAACTTCGTCTCTTCGTGGCGACTCAGACTTTTGCCGACTTCGCTGCCA GATTGGGCAGCAAAGACAAAGCGCTCCAGGTGTTGGGGAACATCAACAACACTTTTGCTCTGCGTATTGT CGATGGTGAAACCCAGGAATATATCGCGGATAACCTGCCAAAGACCCGGCTCAAGTACGTCATGCGGACT CAAGGCCAGAACACGGATGGTAAGGAGCCCATCATGCACGGAGGCAACCAAGGTGAGCGTTTGATGGAGG AGGAGGCGGATCTGTTCCCTGCCCAGTTGCTGGGGATGCTTCCGAACCTGGAATACATAGCCAAGATTTC AGGCGGAACAATCGTAAAAGGCCGTCTGCCCATATTGACCCAGTAA |