| Protein ID: 218534561 |
 T4SS name [ID] | Tra_F [89] |
| Gene symbol | traD |
| Locus tag | pECS88_0093 |
| Strain | Escherichia coli S88 |
| Replicon | plasmid pECOS88 [GenBank: NC_011747] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 72321..74474 [+] |
| Product | conjugal transfer protein TraD |
| Component type | TraD_F |
| UniProt ID | B7LI90 |
| KEGG ID | ecz:pECS88_0093 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | TrwB_AAD_bind [PF10412], Evalue: 3.3e-148, Aligned region: 172..561 TraD_N [PF12615], Evalue: 1.5e-33, Aligned region: 31..129 TraG-D_C [PF12696], Evalue: 1e-18, Aligned region: 419..541 AAA_10 [PF12846], Evalue: 2.3e-10, Aligned region: 399..491 T4SS-DNA_transf [PF02534], Evalue: 5.9e-08, Aligned region: 362..477 |
| Protein Sequence: 717 a.a. [Download] |
| >gi|218534561|ref|YP_002401091.1| conjugal transfer protein TraD [Escherichia coli S88] MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILVGLVLWVKISWQTFVNGCIYWWCTTLEGMR DLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCGEQLWSAFVLATVVALVICLITFFVVSWILGRQGKQ QSENEVTGGRQLTENPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYAR QRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQG SGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTFLRNSPAANLVEEKIEKTAISIRAVLTNYVKA IRYLQGIEHNGESFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRV WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAATLFDVMNTRAFFRSPSHKIA EFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSL KYQARPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAI NDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPGSSESGEVVDMAAYEAWQQENHPDIQQQMQRREEVN INVHRERGEDVEPGDDF |
| Nucleotide Sequence: 2154 bp [Download] |
| >gi|218534477|ref|NC_011747.1|:72321-74474 Escherichia coli S88 plasmid pECOS88, complete sequence ATGAGTTTTAACGCAAAGGATATGACCCAGGGCGGTCAGATTGCGTCCATGCGTATCCGCATGTTCAGCC AGATCGCCAATATCATGCTTTACTGCCTGTTTATTTTTTTCTGGATACTCGTTGGTCTGGTTTTATGGGT AAAAATAAGCTGGCAGACGTTTGTGAACGGCTGTATTTACTGGTGGTGTACCACGCTGGAGGGCATGCGG GATTTAATCAAGTCCCAGCCGGTCTATGAGATCCAGTATTACGGCAAAACCTTCCGGATGAACGCTGCTC AGGTACTGCATGATAAATATATGATCTGGTGCGGAGAGCAGCTATGGTCCGCATTCGTTCTGGCTACAGT TGTGGCACTGGTTATTTGCCTGATTACCTTCTTTGTTGTCTCCTGGATTCTGGGGCGTCAGGGTAAACAA CAGAGCGAAAATGAAGTCACAGGTGGTCGTCAGCTGACGGAGAACCCGAAAGACGTTGCCCGGATGCTGA AAAAAGACGGCAAGGACTCCGATATACGGATTGGCGACCTGCCGATTATCCGGGATTCCGAAATCCAGAA CTTCTGTCTGCACGGCACGGTCGGGGCCGGTAAGTCGGAAGTTATCCGTCGTCTGGCCAACTACGCCCGT CAGCGTGGAGATATGGTGGTGATTTATGACCGTTCAGGGGAATTTGTTAAAAGTTACTATGATCCCTCCA TCGATAAAATCCTGAATCCGCTGGATGCCCGCTGTGCCGCCTGGGATTTGTGGAAGGAGTGCCTGACACA GCCGGATTTTGATAATACCGCAAATACTCTGATCCCGATGGGCACAAAAGAGGACCCGTTCTGGCAGGGT TCAGGACGTACCATTTTTGCGGAAGCGGCGTACCTGATGCGTAATGACCCCAACCGCAGCTACAGCAAAC TGGTGGACACACTGCTTTCCATCAAAATCGAAAAACTGCGTACCTTCCTGCGTAATTCACCGGCGGCCAA CCTGGTGGAAGAGAAAATTGAGAAAACGGCGATTTCCATCCGTGCTGTGCTGACCAACTACGTGAAAGCC ATCCGTTACCTGCAGGGGATTGAGCATAACGGTGAGTCTTTTACCATCCGTGACTGGATGCGGGGTGTCC GGGAAGATCAGAAAAACGGCTGGTTGTTTATCTCGTCGAATGCCGACACCCATGCCTCCCTGAAGCCGGT GATCTCCATGTGGCTGTCCATTGCCATTCGTGGTCTGCTGGCAATGGGAGAAAACCGTAACCGTCGTGTG TGGTTTTTCTGTGATGAGCTACCCACGTTACACAAACTGCCGGACCTGGTGGAGATCCTGCCGGAAGCCC GTAAGTTCGGTGGCTGTTATGTGTTTGGTATCCAGTCCTATGCCCAGCTGGAAGATATCTACGGTGAGAA AGCGGCTGCCACGCTGTTTGACGTCATGAACACTCGTGCCTTTTTCCGTTCTCCCAGCCATAAGATTGCA GAGTTCGCTGCCGGTGAGATTGGTGAGAAAGAGCACCTGAAAGCCAGCGAGCAGTATTCCTACGGTGCTG ATCCGGTACGTGACGGGGTATCGACCGGTAAGGATATGGAGCGCCAGACGCTGGTCAGTTATTCCGACAT TCAGTCTCTGCCGGATCTGACCTGTTATGTCACCCTGCCCGGACCGTATCCGGCAGTAAAACTCTCACTG AAATATCAGGCACGTCCGAAGGTTGCCCCTGAGTTTATTCCGCGTGACATCAACCCAGAAATGGAGAACC GTCTGAGTGCCGTACTTGCCGCAAGGGAAGCAGAAGGTCGTCAGATGGCCAGCCTCTTCGAACCGGATGT GCCGGAAGTTGTTTCCGGAGAAGACGTGACTCAGGCTGAACAGCCGCAACAGCCGGTGTCTCCTGCCATA AACGATAAGAAGTCAGATTCAGGTGTGAATGTTCCGGCAGGGGGGATCGAGCAGGAGCTGAAAATGAAAC CGGAAGAAGAGATGGAACAGCAACTGCCACCCGGGAGCAGTGAATCCGGTGAAGTGGTGGATATGGCCGC TTATGAGGCATGGCAACAGGAAAATCATCCGGACATCCAGCAGCAGATGCAGCGTCGTGAAGAGGTGAAC ATTAATGTGCACCGGGAGCGTGGGGAGGATGTTGAGCCGGGAGATGATTTCTGA |