SecReT4
Protein ID: 217975603
T4SS name [ID]Tra_F [535]
Gene symbol-
Locus tagSbal223_4390
StrainShewanella baltica OS223
Repliconplasmid pS22301 [GenBank: NC_011664] [Browse all T4SS(s) in this replicon]
Location [Strand]57280..59406 [+]
Producttype IV conjugative transfer system coupling protein TraD
Component typeTraD_F
UniProt IDB8EFQ3
KEGG IDsbp:Sbal223_4390
PDB IDNA
Domain hit(s) vs Pfam TrwB_AAD_bind [PF10412], Evalue: 2.8e-157, Aligned region: 173..569
TraD_N [PF12615], Evalue: 2.1e-25, Aligned region: 37..129
TraG-D_C [PF12696], Evalue: 1.4e-22, Aligned region: 427..549
T4SS-DNA_transf [PF02534], Evalue: 3.7e-19, Aligned region: 229..561
AAA_10 [PF12846], Evalue: 8.1e-14, Aligned region: 190..502
Protein Sequence: 708 a.a.     [Download]
>gi|217975603|ref|YP_002360273.1| type IV conjugative transfer system coupling protein TraD [Shewanella baltica OS223]
MTLNPKRTKGSNYTRGGQILFHNLRMFLQINAVLIRWTCYGVLILTALLCFLFIDKDTLTGAYYYWINQT
VSMFRPESHVMQTEWQGTVYTSTLGSQLQNPILIAANSRFWLWSQIYFLISCVIGFVFLSVAMWFFKKKG
DEQTEEHFIRGMQKATPKELAKQLKKDKRQSDFKLDGIGIFKERFEVQHLLLDGTTGAGKSVALRKFLTW
IRERGDKAIIYDKGCTFVSKFYNPATDVLLNPFDERCAYWDVWCDAHEPSDFENMASALIPQHGEGDPFW
VQSARTIFSSTAFKMQDEPKMNQTTERLLELMLTSELESLSEYLKGTESASLVSDKIQKTAISIKSVLAA
YIKSLRFLAGLDEKDGQGKLLRRKFSIREWVKNDAENGFLFLSSNAQQHASLRPLISMWLSIASTAILEQ
DEDPDRRIWVLMDEAPSLHKLPELAETIAEVRKFGGCYVIGIQSFAQLKKVYGENAALEMFDLLNTRLFF
RSPSNEMAKISSHDLGEQEVDVSKEQYSYGANEIRDGVSLGHQTITRPVVTPSEIMQLEDLQFWLRTPGN
YPVVRVDLEFNQMRSLCAPFIKRNYTPSENIKQIEWSLNYHQFSAVQHVDKADKTKLQSIHDTMYEGDEN
NDERSAEAQRMTKLAEKTDAVAQSLIDAKKAKPTELALKDAQKKKAAEKQKTNDQHIEDAQRLEEQQIAS
VHEEISLD
 
Nucleotide Sequence: 2127 bp     [Download]
>gi|217975547|ref|NC_011664.1|:57280-59406 Shewanella baltica OS223 plasmid pS22301, complete sequence
GTGACCTTAAACCCCAAACGTACTAAAGGCAGTAACTACACCCGTGGTGGCCAGATTTTATTTCACAATT
TGCGGATGTTTCTGCAGATTAACGCCGTGCTTATCCGCTGGACGTGTTATGGCGTGCTCATCTTAACAGC
GCTGCTATGCTTCCTATTCATTGATAAAGATACCTTAACAGGCGCTTATTATTACTGGATAAACCAAACG
GTTAGCATGTTTAGACCAGAAAGCCATGTCATGCAGACTGAATGGCAAGGCACTGTCTATACCAGTACGT
TAGGGTCTCAATTGCAAAACCCAATACTGATTGCGGCCAACAGCCGCTTTTGGTTGTGGTCACAAATCTA
CTTCCTTATAAGCTGTGTGATTGGCTTCGTATTTCTCTCCGTGGCCATGTGGTTTTTCAAGAAAAAAGGG
GACGAGCAAACCGAGGAACACTTTATTCGGGGGATGCAAAAAGCCACGCCGAAGGAATTAGCAAAACAGC
TTAAAAAGGACAAGCGCCAGTCCGATTTCAAGCTCGATGGCATCGGTATTTTCAAAGAACGCTTTGAAGT
ACAGCACTTGTTACTTGATGGCACCACGGGCGCGGGAAAGTCCGTGGCGCTGCGTAAGTTTTTAACGTGG
ATACGTGAACGGGGCGACAAAGCCATTATCTATGACAAAGGCTGTACCTTTGTCAGCAAGTTCTATAATC
CGGCAACGGACGTACTACTAAACCCGTTTGATGAACGCTGTGCTTACTGGGATGTGTGGTGTGATGCGCA
TGAGCCCTCAGATTTTGAGAACATGGCGAGCGCGCTCATTCCCCAGCATGGTGAGGGCGATCCATTCTGG
GTGCAATCTGCTCGCACCATTTTTTCATCTACTGCATTTAAGATGCAAGATGAACCTAAAATGAACCAAA
CCACTGAACGACTGCTTGAACTCATGCTGACCAGCGAACTTGAGTCCTTAAGTGAATACTTAAAAGGGAC
CGAATCGGCCTCACTGGTATCAGATAAAATCCAAAAAACGGCGATATCCATTAAGTCGGTCCTCGCGGCC
TACATCAAATCATTACGATTCCTTGCCGGACTGGATGAAAAGGACGGACAGGGAAAACTCCTTCGCCGCA
AATTTTCAATTCGTGAGTGGGTGAAAAACGATGCCGAAAATGGCTTTCTATTTCTATCCAGCAACGCACA
GCAACATGCATCATTGCGCCCCTTGATCTCAATGTGGCTATCCATTGCCTCGACCGCCATTTTGGAACAA
GACGAAGATCCGGACCGCAGAATTTGGGTGTTGATGGATGAAGCACCAAGCTTGCACAAGTTACCTGAAC
TTGCCGAAACAATCGCAGAAGTGCGTAAGTTTGGCGGCTGTTATGTCATAGGCATTCAGTCATTCGCACA
GCTTAAAAAAGTCTATGGCGAAAATGCGGCACTTGAAATGTTCGACTTGCTCAACACTCGCTTATTTTTC
CGCTCACCCTCTAACGAAATGGCCAAAATCTCGTCTCACGATTTAGGCGAGCAAGAAGTCGATGTATCTA
AAGAGCAATACAGCTACGGCGCTAATGAAATCAGGGATGGCGTATCACTGGGCCATCAAACCATTACCCG
CCCTGTGGTCACGCCCTCTGAAATCATGCAGCTTGAAGATTTACAATTTTGGCTGCGCACGCCTGGCAAT
TATCCCGTGGTAAGAGTGGATTTAGAGTTTAACCAAATGCGCTCACTGTGCGCCCCGTTTATCAAACGTA
ACTACACCCCGTCTGAAAACATAAAGCAGATTGAATGGAGTCTGAACTATCACCAGTTCAGTGCGGTTCA
ACACGTCGATAAAGCGGATAAAACCAAGCTCCAAAGCATTCATGACACCATGTATGAAGGGGATGAAAAC
AATGATGAACGCAGCGCGGAAGCGCAGCGCATGACCAAACTTGCTGAAAAAACCGATGCGGTCGCCCAAA
GCCTCATCGATGCGAAAAAGGCCAAACCGACTGAGTTAGCGCTCAAGGATGCGCAGAAGAAAAAAGCCGC
TGAAAAACAAAAGACCAATGACCAGCACATTGAGGATGCACAGCGACTTGAAGAGCAACAAATAGCCTCA
GTACACGAAGAAATATCGCTCGACTAA