| Protein ID: 189183308 |
 T4SS name [ID] | Tra_F [566] |
| Gene symbol | - |
| Locus tag | OTT_0401 |
| Strain | Orientia tsutsugamushi str. Ikeda |
| Replicon | chromosome [GenBank: NC_010793] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 420842..422596 [-] |
| Product | conjugative transfer protein TraD |
| Component type | TraD_F |
| UniProt ID | B3CQV2 |
| KEGG ID | ott:OTT_1137, ott:OTT_0401, ott:OTT_1484 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | TrwB_AAD_bind [PF10412], Evalue: 2.8e-132, Aligned region: 180..560 TraD_N [PF12615], Evalue: 1.6e-27, Aligned region: 28..137 TraG-D_C [PF12696], Evalue: 1.1e-20, Aligned region: 420..542 T4SS-DNA_transf [PF02534], Evalue: 1.3e-17, Aligned region: 335..555 AAA_10 [PF12846], Evalue: 8.9e-09, Aligned region: 420..496 T2SE [PF00437], Evalue: 1.5e-05, Aligned region: 191..228 |
| Protein Sequence: 584 a.a. [Download] |
| >gi|189183308|ref|YP_001937093.1| conjugative transfer protein TraD [Orientia tsutsugamushi str. Ikeda] MNFQNQGNFTRGSQLFAHKLRMFGQGSTNVFIIGLGLSIFWIICRLYQKVFLSSLYYFVIERYVQLKLAI GEHFYDIDQIGIKFYSLRFKKWMHLNAQDFLHEFYTSQHGFKIQQLLEFLINSALLEGLIVFAIGVIISI VFFTAQGKNTIIKAKIRGADFVECKCLSKMLKSAKKASKICFGGLPLVKNSERLHILITGTTGTGKTNML NELLPQIRLHKDRAIIVDTTGAFTDRFFDSKCDKLLNPLEKNSEQWLPWNDCFEAANFHDIASSFSNYTP KLDDFFAKNAELVLSEALKLYQDDKDIIKLIHTIIYSDNRQFAKAFRNTAVSGIISESALETSAGIQSTL GKNITSLQYLKPGGSFSIKEWFSNSNETGWLFITATPSQRATLCPLISAWISIAIKALMCRNPNHDNKNM WFILDELPALQKVSSLPVALAESRKYGGCFVAVLQNIHQLEAIYGAAECASMLDLFNSKFIFRVSDQVTA YKSALTLGEQEIIETQENLSYGSNTMRDGVNMNNVERKKILVMPSEIMNLPDLTCYVKLAGNFPITKLTM QLQNLNTAFVCEYKLLKKLKLVEY |
| Nucleotide Sequence: 1755 bp [Download] |
| >gi|189182907|ref|NC_010793.1|:c422596-420842 Orientia tsutsugamushi str. Ikeda, complete genome ATGAATTTTCAGAATCAAGGAAATTTCACCAGAGGATCGCAGTTATTTGCCCATAAGTTAAGAATGTTTG GGCAAGGTAGTACCAACGTTTTTATAATTGGATTAGGATTATCGATATTCTGGATTATATGTCGATTATA TCAAAAAGTTTTTCTGAGCAGCTTGTATTATTTTGTAATTGAAAGATATGTGCAGCTTAAGCTAGCAATT GGTGAGCACTTTTATGATATCGATCAAATAGGCATTAAGTTTTATAGTTTAAGGTTTAAAAAATGGATGC ACCTCAATGCTCAAGACTTTTTGCATGAATTTTATACAAGCCAACATGGATTTAAAATACAGCAATTATT GGAATTCTTAATTAATTCAGCATTGTTAGAAGGATTAATTGTTTTTGCTATTGGTGTGATAATCTCAATT GTTTTCTTTACAGCTCAAGGCAAAAACACGATTATTAAGGCCAAAATTAGAGGTGCTGATTTTGTAGAGT GCAAATGCCTATCTAAAATGCTAAAAAGCGCTAAAAAGGCCTCGAAAATCTGTTTTGGAGGCTTGCCATT AGTAAAGAATAGTGAAAGATTACATATTCTGATTACTGGAACAACAGGTACTGGTAAAACTAATATGCTT AACGAACTGCTACCACAAATTCGATTACATAAAGATCGAGCAATAATTGTAGATACAACTGGAGCTTTTA CTGATAGATTTTTTGATTCTAAATGTGATAAGCTGCTTAATCCTTTGGAAAAAAATAGTGAGCAATGGTT GCCTTGGAATGATTGTTTTGAAGCAGCTAATTTTCATGATATAGCTAGTAGTTTTAGTAATTATACTCCT AAACTTGATGACTTTTTTGCTAAAAATGCTGAATTAGTCTTATCTGAAGCATTGAAGCTATATCAGGATG ATAAAGATATCATAAAACTAATTCATACAATCATTTACTCTGATAATAGACAATTTGCAAAAGCTTTTAG AAACACAGCTGTATCAGGTATTATAAGCGAAAGTGCGCTTGAAACTTCTGCAGGAATTCAGTCTACTCTT GGAAAGAATATTACTTCGCTACAATATTTAAAGCCTGGAGGTAGTTTTAGCATCAAGGAATGGTTTAGTA ATTCGAATGAAACTGGCTGGCTATTTATCACAGCTACCCCAAGTCAAAGAGCTACTTTATGCCCACTTAT TTCAGCCTGGATAAGCATAGCTATCAAGGCTTTGATGTGTAGAAATCCTAATCATGATAACAAAAACATG TGGTTTATACTTGATGAATTGCCAGCTCTACAAAAAGTTTCATCTTTACCAGTTGCTTTAGCTGAAAGTA GAAAGTATGGAGGCTGCTTTGTTGCTGTATTGCAGAACATTCATCAATTAGAAGCAATATATGGGGCTGC TGAATGTGCTTCTATGCTGGATTTGTTTAATAGTAAATTTATTTTTCGAGTTAGTGATCAGGTTACAGCT TATAAGTCAGCATTAACACTAGGTGAGCAAGAAATTATTGAAACTCAAGAGAACTTGTCATATGGATCAA ATACTATGCGAGATGGGGTAAATATGAATAATGTTGAGCGTAAAAAGATTTTAGTTATGCCATCTGAAAT TATGAACCTACCAGACTTAACTTGTTATGTAAAACTTGCTGGTAACTTTCCTATCACAAAACTAACTATG CAGCTACAAAACTTAAATACAGCTTTTGTTTGTGAATATAAATTGCTCAAAAAACTTAAGTTAGTAGAGT ATTAA |