| Protein ID: 169546473 |
 T4SS name [ID] | Tra_F [97] |
| Gene symbol | - |
| Locus tag | pVM01_p087 |
| Strain | Escherichia coli plasmid pVM01 (NC_010409) |
| Replicon | plasmid pVM01 [GenBank: NC_010409] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 100030..102183 [-] |
| Product | conjugal transfer protein TraD |
| Component type | TraD_F |
| UniProt ID | B1P7R0 |
| KEGG ID | NA |
| PDB ID | NA |
| Domain hit(s) vs Pfam | TrwB_AAD_bind [PF10412], Evalue: 4.8e-148, Aligned region: 172..561 TraD_N [PF12615], Evalue: 5.2e-34, Aligned region: 31..129 TraG-D_C [PF12696], Evalue: 1e-18, Aligned region: 419..541 AAA_10 [PF12846], Evalue: 2.3e-10, Aligned region: 399..491 T4SS-DNA_transf [PF02534], Evalue: 8.7e-08, Aligned region: 382..478 |
| Protein Sequence: 717 a.a. [Download] |
| >gi|169546473|ref|YP_001711936.1| conjugal transfer protein TraD [Escherichia coli] MSFNAKDMTQGGQIASMRIRMFSQIANIILYCLFIFFWILVGLVLWVKISWQTFVNGCIYWWCTTLEGMR DLIRSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCGEQLWSAFVLASVVALVICLITFFVVSWILGRQGKQ QSENEITGGRQLTDNPKEVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYAR QRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQG SGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTFLRNSPAANLVEEKIKKTAISIRAVLTNYVKA IRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRV WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAATLFDVMNTRAFFRSPSHKIA EFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSL KYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGREMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAI NDKKSDAGVNVSAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAVYEAWQREQNPDIQQKMQRREEVN INVHRERGENVEPGDDF |
| Nucleotide Sequence: 2154 bp [Download] |
| >gi|169546410|ref|NC_010409.1|:c102183-100030 Escherichia coli plasmid pVM01, complete sequence ATGAGTTTTAACGCAAAGGATATGACCCAGGGCGGTCAGATTGCGTCCATGCGTATCCGCATGTTCAGTC AGATCGCCAATATCATACTTTACTGCCTGTTTATTTTTTTCTGGATCCTAGTTGGTCTGGTTTTATGGGT AAAAATAAGCTGGCAGACGTTTGTGAATGGCTGCATTTACTGGTGGTGCACCACGCTGGAAGGCATGCGG GATTTAATCAGGTCCCAGCCGGTCTATGAGATCCAGTATTACGGCAAAACCTTCCGGATGAACGCGGCTC AGGTACTGCATGATAAATATATGATCTGGTGCGGTGAGCAGTTATGGTCGGCATTCGTTCTGGCGTCTGT CGTGGCCCTGGTTATCTGCCTGATCACCTTCTTTGTTGTCTCCTGGATTCTGGGGCGTCAGGGTAAACAA CAGAGCGAAAATGAAATCACAGGTGGTCGTCAGCTGACTGACAATCCGAAAGAGGTGGCCAGGATGCTGA AAAAAGATGGCAAGGATTCCGATATCCGGATTGGCGATCTGCCGATTATCCGGGATTCTGAAATCCAGAA CTTCTGTCTGCACGGCACTGTCGGGGCCGGTAAGTCGGAGGTTATCCGTCGTCTGGCCAACTACGCCCGT CAGCGTGGTGATATGGTGGTGATTTATGACCGTTCGGGGGAATTTGTTAAAAGTTACTATGATCCCTCCA TCGATAAAATCCTGAATCCGCTGGATGCACGCTGTGCTGCCTGGGATTTGTGGAAGGAGTGCCTGACACA GCCAGATTTTGATAATACCGCAAATACTCTGATCCCGATGGGGACAAAAGAGGACCCGTTCTGGCAGGGT TCAGGACGTACCATTTTTGCGGAAGCGGCATACCTGATGCGTAATGACCCCAACCGCAGCTACAGCAAAC TGGTGGACACACTGCTTTCCATCAAAATTGAAAAGCTGCGTACCTTCCTGCGTAATTCACCGGCGGCCAA CCTGGTGGAAGAGAAAATCAAGAAAACGGCCATATCCATCCGTGCTGTGCTGACCAACTACGTGAAAGCC ATCCGTTACCTGCAGGGGATTGAGCATAACGGTGAGCCCTTCACCATCCGTGACTGGATGCGTGGTGTCC GGGAAGATCAGAAAAACGGCTGGCTGTTTATTTCGTCGAACGCCGACACCCATGCCTCCCTGAAGCCGGT GATCTCCATGTGGCTGTCCATTGCTATTCGTGGTCTGCTGGCAATGGGAGAAAACCGTAACCGTCGTGTG TGGTTTTTCTGTGACGAGTTACCCACGTTACACAAACTGCCGGACCTGGTGGAGATCCTGCCGGAAGCCC GTAAGTTCGGTGGCTGTTATGTGTTTGGTATCCAGTCCTATGCCCAGCTGGAAGATATCTACGGTGAGAA AGCGGCTGCCACGCTGTTTGACGTCATGAACACCCGTGCCTTTTTCCGTTCTCCCAGCCATAAGATTGCA GAGTTCGCTGCCGGTGAAATTGGTGAGAAAGAGCACCTGAAAGCCAGCGAGCAGTATTCCTACGGTGCTG ATCCGGTACGTGACGGGGTATCGACCGGTAAGGATATGGAGCGTCAGACGCTGGTCAGTTATTCCGACAT TCAGTCTCTGCCGGATCTGACCTGTTATGTCACCCTGCCCGGACCGTATCCGGCAGTAAAACTCTCCCTG AAATATCAGACACGACCGAAGGTCGCTCCGGAGTTTATTCCGCGTGACATCAACCCGGAAATGGAGAACC GTCTGAGTGCCGTACTTGCCGCAAGGGAAGCAGAAGGTCGTGAGATGGCCAGCCTCTTCGAACCGGATGT CCCGGAGGTTGTTTCCGGAGAAGACGTGACTCAGGCTGAACAGCCGCAACAGCCGGTGTCTCCTGCCATC AACGATAAGAAGTCAGATGCAGGTGTGAATGTTTCGGCAGGGGGGATCGAGCAGGAGCTGAAAATGAAAC CGGAAGAAGAGATGGAACAGCAACTGCCACCCGGGATCAGTGAATCCGGTGAAGTGGTGGATATGGCCGT TTATGAGGCATGGCAACGGGAGCAGAATCCGGATATCCAGCAGAAGATGCAGCGTCGTGAAGAGGTGAAC ATCAATGTGCACCGGGAGCGCGGGGAGAATGTTGAGCCGGGAGATGATTTCTGA |