Protein ID: 157418139 |
T4SS name [ID] | Tra_F [111] |
Gene symbol | traD |
Locus tag | APECO1_O1CoBM56 |
Strain | Escherichia coli APEC O1 |
Replicon | plasmid pAPEC-O1-ColBM [GenBank: NC_009837] [Browse all T4SS(s) in this replicon] |
Location [Strand] | 41689..43842 [+] |
Product | conjugal transfer protein TraD |
Component type | TraD_F |
UniProt ID | Q27TG6 |
KEGG ID | ecv:APECO1_O1CoBM56 |
PDB ID | NA |
Domain hit(s) vs Pfam | TrwB_AAD_bind [PF10412], Evalue: 4.8e-148, Aligned region: 172..561 TraD_N [PF12615], Evalue: 5.2e-34, Aligned region: 31..129 TraG-D_C [PF12696], Evalue: 1e-18, Aligned region: 419..541 AAA_10 [PF12846], Evalue: 2.3e-10, Aligned region: 399..491 T4SS-DNA_transf [PF02534], Evalue: 8.7e-08, Aligned region: 382..478 |
Protein Sequence: 717 a.a. [Download] |
>gi|157418139|ref|YP_001481211.1| conjugal transfer protein TraD [Escherichia coli APEC O1] MSFNAKDMTQGGQIASMRIRMFSQIANIILYCLFIFFWILVGLVLWVKISWQTFVNGCIYWWCTTLEGMR DLIRSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCGEQLWSAFVLASVVALVICLITFFVVSWILGRQGKQ QSENEITGGRQLTDNPKEVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYAR QRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQG SGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTFLRNSPAANLVEEKIKKTAISIRAVLTNYVKA IRYLQGIEHNGEPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRV WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAATLFDVMNTRAFFRSPSHKIA EFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSL KYQTRPKVAPEFIPRDINPEMENRLSAVLAAREAEGREMASLFEPDVPEVVSGEDVTQAEQPQQPVSPAI NDKKSDAGVNVSAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAVYEAWQREQNPDIQQKMQRREEVN INVHRERGENVEPGDDF |
Nucleotide Sequence: 2154 bp [Download] |
>gi|157418083|ref|NC_009837.1|:41689-43842 Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequence ATGAGTTTTAACGCAAAGGATATGACCCAGGGCGGTCAGATTGCGTCCATGCGTATCCGCATGTTCAGTC AGATCGCCAATATCATACTTTACTGCCTGTTTATTTTTTTCTGGATCCTAGTTGGTCTGGTTTTATGGGT AAAAATAAGCTGGCAGACGTTTGTGAATGGCTGCATTTACTGGTGGTGCACCACGCTGGAAGGCATGCGG GATTTAATCAGGTCCCAGCCGGTCTATGAGATCCAGTATTACGGCAAAACCTTCCGGATGAACGCGGCTC AGGTACTGCATGATAAATATATGATCTGGTGCGGTGAGCAGTTATGGTCGGCATTCGTTCTGGCGTCTGT CGTGGCCCTGGTTATCTGCCTGATCACCTTCTTTGTTGTCTCCTGGATTCTGGGGCGTCAGGGTAAACAA CAGAGCGAAAATGAAATCACAGGTGGTCGTCAGCTGACTGACAATCCGAAAGAGGTGGCCAGGATGCTGA AAAAAGATGGCAAGGATTCCGATATCCGGATTGGCGATCTGCCGATTATCCGGGATTCTGAAATCCAGAA CTTCTGTCTGCACGGCACTGTCGGGGCCGGTAAGTCGGAGGTTATCCGTCGTCTGGCCAACTACGCCCGT CAGCGTGGTGATATGGTGGTGATTTATGACCGTTCGGGGGAATTTGTTAAAAGTTACTATGATCCCTCCA TCGATAAAATCCTGAATCCGCTGGATGCACGCTGTGCTGCCTGGGATTTGTGGAAGGAGTGCCTGACACA GCCAGATTTTGATAATACCGCAAATACTCTGATCCCGATGGGGACAAAAGAGGACCCGTTCTGGCAGGGT TCAGGACGTACCATTTTTGCGGAAGCGGCATACCTGATGCGTAATGACCCCAACCGCAGCTACAGCAAAC TGGTGGACACACTGCTTTCCATCAAAATTGAAAAGCTGCGTACCTTCCTGCGTAATTCACCGGCGGCCAA CCTGGTGGAAGAGAAAATCAAGAAAACGGCCATATCCATCCGTGCTGTGCTGACCAACTACGTGAAAGCC ATCCGTTACCTGCAGGGGATTGAGCATAACGGTGAGCCCTTCACCATCCGTGACTGGATGCGTGGTGTCC GGGAAGATCAGAAAAACGGCTGGCTGTTTATTTCGTCGAACGCCGACACCCATGCCTCCCTGAAGCCGGT GATCTCCATGTGGCTGTCCATTGCTATTCGTGGTCTGCTGGCAATGGGAGAAAACCGTAACCGTCGTGTG TGGTTTTTCTGTGACGAGTTACCCACGTTACACAAACTGCCGGACCTGGTGGAGATCCTGCCGGAAGCCC GTAAGTTCGGTGGCTGTTATGTGTTTGGTATCCAGTCCTATGCCCAGCTGGAAGATATCTACGGTGAGAA AGCGGCTGCCACGCTGTTTGACGTCATGAACACCCGTGCCTTTTTCCGTTCTCCCAGCCATAAGATTGCA GAGTTCGCTGCCGGTGAAATTGGTGAGAAAGAGCACCTGAAAGCCAGCGAGCAGTATTCCTACGGTGCTG ATCCGGTACGTGACGGGGTATCGACCGGTAAGGATATGGAGCGTCAGACGCTGGTCAGTTATTCCGACAT TCAGTCTCTGCCGGATCTGACCTGTTATGTCACCCTGCCCGGACCGTATCCGGCAGTAAAACTCTCCCTG AAATATCAGACACGACCGAAGGTCGCTCCGGAGTTTATTCCGCGTGACATCAACCCGGAAATGGAGAACC GTCTGAGTGCCGTACTTGCCGCAAGGGAAGCAGAAGGTCGTGAGATGGCCAGCCTCTTCGAACCGGATGT CCCGGAGGTTGTTTCCGGAGAAGACGTGACTCAGGCTGAACAGCCGCAACAGCCGGTGTCTCCTGCCATC AACGATAAGAAGTCAGATGCAGGTGTGAATGTTTCGGCAGGGGGGATCGAGCAGGAGCTGAAAATGAAAC CGGAAGAAGAGATGGAACAGCAACTGCCACCCGGGATCAGTGAATCCGGTGAAGTGGTGGATATGGCCGT TTATGAGGCATGGCAACGGGAGCAGAATCCGGATATCCAGCAGAAGATGCAGCGTCGTGAAGAGGTGAAC ATCAATGTGCACCGGGAGCGCGGGGAGAATGTTGAGCCGGGAGATGATTTCTGA |