| Protein ID: 148550661 |
 T4SS name [ID] | Tra_F [524] |
| Gene symbol | - |
| Locus tag | Swit_5224 |
| Strain | Sphingomonas wittichii RW1 |
| Replicon | plasmid pSWIT01 [GenBank: NC_009507] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 116438..118729 [-] |
| Product | hypothetical protein |
| Component type | TraD_F |
| UniProt ID | A5VGB7 |
| KEGG ID | swi:Swit_5224 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | TrwB_AAD_bind [PF10412], Evalue: 1.2e-143, Aligned region: 225..610 TraG-D_C [PF12696], Evalue: 8.6e-16, Aligned region: 470..591 T4SS-DNA_transf [PF02534], Evalue: 9.8e-13, Aligned region: 430..593 AAA_10 [PF12846], Evalue: 2.3e-12, Aligned region: 241..548 DUF87 [PF01935], Evalue: 1.8e-05, Aligned region: 240..287 |
| Protein Sequence: 763 a.a. [Download] |
| >gi|148550661|ref|YP_001260100.1| hypothetical protein Swit_5224 [Sphingomonas wittichii RW1] MARKNDIRTDGRAIPLTHHSARGRVQRNSGNFTRGSQLLTHELLMWFSGAKLPILMWFFLFAAAWFVIMS IKLDEHGFQLICMKIYAALWNWVDLNPNKRVNVTLPSGEVMRTVMPAVPYIAEVIQAWKIAMKGLLAAFF VSIFITIPVALWFVDLSRRRGKTILQERHERGAMLVARHVLLNEISQHNYAKFEEEAQDRLPGLAPAKIL DMPFRARKAAGIHHPYTLAGIPYPHRTEQSHTMLIGTTGSGKTTELRSLVSQVRAREDTAVIFDLTGAYV EAFYDSARDTILNPMDARCPAWSIFNDCTTHSEFTAAAAALIPSDGGSAEPFWALAARTLFIEMCIRLQE RGATTNLALSENLMTADLKRVHRFLANTIADPLTAPEAARMAESIRAVFNTNAQVLRFLPDEGPRFSIRD WTTTEKKPGAILFITSNYVDLAMNRALLTLWMDIAINRLMTMPRTRDLRTWFMFDELGALHRLPAIENGL QTARAFGGAMILGIHSFEKLIEVYGEQGARNLASLARSKLMLATADLDTAEQCARYIGNREVRQMDEAYS YGYNNTRDAATLTPRKQVEPLVIADDITNLPSMHGFVKFPDGFPAARIQLQWKDYPQVAQGFIARPNLQP VRSRRGEEAFEGSDGGEAGGRDGAAQVIGEVADPVNLAKELAANILSAEVEDEHDEAARRAQRAAESDER PATPTHAADRAQAARAATGDPQTVPRDRDGRGQPAPVPQVEDQTLVELRQAFGREDDGMDMGI |
| Nucleotide Sequence: 2292 bp [Download] |
| >gi|148550551|ref|NC_009507.1|:c118729-116438 Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence ATGGCGCGTAAAAACGATATCCGCACAGACGGCCGGGCCATCCCCTTGACCCATCACAGCGCGCGCGGAC GGGTGCAGCGCAATTCGGGCAATTTTACCCGCGGCTCGCAGCTTCTCACCCACGAACTTCTGATGTGGTT CTCGGGTGCGAAACTGCCCATCCTGATGTGGTTCTTCCTCTTCGCGGCCGCCTGGTTCGTGATCATGTCG ATCAAGCTCGACGAGCACGGCTTCCAGCTCATCTGCATGAAGATTTATGCCGCGCTCTGGAACTGGGTCG ACCTCAACCCCAACAAGCGCGTCAACGTCACCCTGCCGAGCGGCGAGGTCATGCGTACGGTGATGCCCGC GGTGCCTTATATCGCCGAGGTCATCCAGGCCTGGAAGATCGCGATGAAAGGCCTTCTGGCGGCCTTCTTC GTATCCATCTTCATCACCATCCCGGTCGCACTCTGGTTCGTCGATCTTTCGCGCCGGCGGGGCAAGACGA TCCTTCAGGAACGCCACGAGCGCGGAGCCATGCTGGTCGCCCGCCACGTGCTTCTCAACGAGATCAGCCA GCACAATTACGCGAAGTTCGAAGAGGAGGCGCAGGATCGCCTGCCCGGCCTCGCCCCGGCCAAGATTCTC GACATGCCGTTTCGTGCACGCAAGGCGGCGGGCATCCATCACCCCTATACGCTTGCGGGCATCCCTTATC CGCATCGCACCGAGCAGTCGCATACCATGCTCATCGGTACGACCGGATCGGGCAAGACGACCGAACTCAG GAGCCTGGTTTCGCAGGTGCGAGCCCGCGAGGACACGGCCGTCATCTTCGATCTCACCGGCGCCTATGTC GAAGCCTTCTACGATTCCGCGCGCGATACGATCCTCAACCCGATGGACGCGCGCTGCCCGGCCTGGTCGA TCTTCAACGACTGCACCACGCATAGCGAATTCACTGCCGCAGCGGCGGCGCTCATTCCCTCGGACGGCGG CTCTGCCGAACCCTTCTGGGCGCTCGCGGCGCGCACCCTCTTCATCGAGATGTGCATCCGGCTCCAGGAG CGCGGCGCGACGACCAATCTCGCGCTCTCCGAGAACCTGATGACGGCCGACCTGAAGCGGGTTCACCGTT TCCTTGCCAACACGATCGCGGACCCGCTCACCGCGCCGGAAGCCGCACGCATGGCGGAATCGATCCGCGC GGTCTTCAATACCAATGCGCAGGTGCTGCGCTTCCTTCCCGACGAGGGGCCACGCTTCTCGATCCGCGAC TGGACCACGACCGAGAAGAAGCCCGGCGCGATCCTGTTCATCACCTCGAACTATGTCGATCTGGCGATGA ACCGGGCGCTGCTGACGCTGTGGATGGACATCGCCATCAACCGCCTCATGACCATGCCGCGCACCCGCGA TCTGCGCACCTGGTTCATGTTCGACGAACTCGGCGCACTCCATCGTCTGCCCGCGATCGAGAATGGTCTC CAGACCGCCCGCGCGTTCGGCGGCGCGATGATCCTGGGGATCCACAGCTTCGAAAAACTGATCGAGGTCT ATGGCGAGCAGGGTGCCCGCAATCTCGCCTCGCTCGCGCGCTCCAAGCTGATGCTCGCAACCGCCGATCT CGACACCGCCGAGCAATGCGCGCGCTACATCGGCAACCGCGAAGTACGGCAGATGGATGAAGCCTATAGC TACGGCTACAACAACACGCGCGACGCCGCGACGCTGACGCCGCGCAAGCAGGTCGAGCCGCTCGTCATCG CGGACGACATCACCAACCTGCCCTCGATGCATGGTTTCGTGAAATTCCCTGATGGCTTCCCCGCGGCGCG CATCCAGCTCCAGTGGAAAGACTACCCCCAGGTCGCCCAGGGCTTCATCGCCCGTCCCAATCTCCAGCCG GTGCGATCAAGGCGCGGAGAGGAGGCGTTCGAGGGGAGCGATGGGGGCGAAGCGGGCGGGCGCGATGGCG CCGCGCAGGTGATCGGGGAGGTTGCCGATCCCGTCAATCTGGCCAAGGAACTTGCCGCCAATATCCTGTC GGCCGAGGTCGAGGATGAGCATGATGAAGCGGCCCGCCGGGCGCAGCGTGCGGCCGAGAGCGACGAGCGG CCAGCAACCCCCACGCACGCCGCGGACAGGGCACAGGCGGCGCGCGCTGCGACCGGGGATCCTCAGACCG TGCCGCGCGATCGCGACGGGCGGGGTCAACCTGCGCCAGTGCCCCAGGTCGAGGATCAGACGCTGGTCGA GCTAAGGCAGGCGTTCGGGCGCGAGGACGACGGCATGGACATGGGGATCTGA |