| Protein ID: 148550599 |
 T4SS name [ID] | Tra_F [524] |
| Gene symbol | - |
| Locus tag | Swit_5160 |
| Strain | Sphingomonas wittichii RW1 |
| Replicon | plasmid pSWIT01 [GenBank: NC_009507] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 54040..56346 [-] |
| Product | hypothetical protein |
| Component type | TraD_F |
| UniProt ID | A5VG55 |
| KEGG ID | swi:Swit_5160 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | TrwB_AAD_bind [PF10412], Evalue: 4.5e-145, Aligned region: 224..609 TraG-D_C [PF12696], Evalue: 1e-16, Aligned region: 469..590 T4SS-DNA_transf [PF02534], Evalue: 1.2e-13, Aligned region: 429..591 AAA_10 [PF12846], Evalue: 1.8e-13, Aligned region: 240..547 DUF87 [PF01935], Evalue: 1e-05, Aligned region: 239..283 |
| Protein Sequence: 768 a.a. [Download] |
| >gi|148550599|ref|YP_001260038.1| hypothetical protein Swit_5160 [Sphingomonas wittichii RW1] MAREDIRTDGRPVPLTHHSARGRVQRNAGNFTRGSQLLTHEMLMWFSGAKLPFILWFFAFLAAWFIIMSL KLDEHGFQLVCMKVYATLWNWIDLNPNKRVNVTLPNGDLMRTVMKAVPYIPEVITAWAVAMRGLIGAFLI SVFITIPAAIWFVDISHRRGRSILQERHERGAMLVDRSVLLVEINEHNRVKFEEEAADLFPGLSSRQVLA LPFRARKEAGIHHPYTLAGIPFPHRTEQSHAMLIGTTGSGKTTELRSLVTQMRERQDTAVIFDLTGAYVE AFYDPTRDTILNPMDARCPAWSIFNDCRTHSEFTAAAAALIPSDGGSSEPFWALAARTLFIEMCIRLMER GQTSNLALSENLMTADLKRVHRFLANTIADPLTAPEAARMAESIRAVFNTNAQVLRFLPDEGESFSIRDW ITRDKKPGSILFVTSNYVDLPMNRALLTLWMDLAINRLMTLPRTRSLRTWFMFDELGALHRLPAIENGLQ TARAFGGAMILGIHSFEKLVEVYGEQGARNLASLARSKLILATADLDTAEQCARYIGNREVRQMDEAYSY GYNNTRDASTLTPRKQVEPLVIADDITNLPSMHGFVKFPDGFPAARILLEWKDYPQVAQGFVQRPDVGPV RSRRGEEVFEEDGAGEAGGRDGSLQVVEEVAEITNLARDLAARILSAEVEEEDDAARRAAQRADDRDEQA TPGTHSADRAQAARASGEEQPVSARDRDDRRDGHRHGETSPQVEDQTLIELRHDFSTGREDDGMDMGI |
| Nucleotide Sequence: 2307 bp [Download] |
| >gi|148550551|ref|NC_009507.1|:c56346-54040 Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence ATGGCGCGTGAGGACATCCGCACGGACGGGCGTCCCGTCCCGCTCACCCATCATTCGGCGCGCGGCCGCG TGCAGCGCAATGCCGGCAATTTCACCCGCGGCAGCCAGCTACTCACCCATGAGATGCTGATGTGGTTCTC GGGCGCCAAGCTGCCCTTCATCCTCTGGTTCTTCGCCTTTCTCGCCGCCTGGTTCATCATCATGTCGCTC AAGCTCGACGAGCATGGTTTCCAGCTCGTCTGCATGAAGGTCTATGCGACCCTCTGGAACTGGATCGACC TCAATCCGAACAAGCGCGTCAACGTCACGCTGCCGAACGGCGACCTCATGCGCACCGTGATGAAAGCGGT GCCCTATATTCCCGAGGTCATCACAGCCTGGGCCGTCGCGATGCGGGGCCTCATCGGCGCTTTCCTGATC TCGGTCTTCATCACCATTCCGGCCGCCATCTGGTTCGTCGACATCTCGCATCGGCGCGGCCGTTCGATCC TTCAGGAACGGCATGAACGCGGCGCCATGCTGGTTGATCGCAGCGTGCTTCTGGTGGAGATCAACGAGCA TAACCGGGTGAAGTTCGAAGAGGAGGCGGCCGACCTCTTCCCCGGCCTGTCCTCGCGGCAGGTTCTCGCG CTCCCGTTCCGAGCGCGCAAGGAAGCCGGCATCCATCATCCCTACACGCTCGCGGGCATCCCCTTTCCGC ACCGCACCGAACAATCCCATGCGATGCTCATCGGCACCACCGGATCAGGCAAGACGACCGAGCTCAGAAG CCTCGTCACCCAGATGCGCGAGCGCCAGGACACGGCCGTCATCTTCGATCTCACCGGCGCCTATGTCGAA GCCTTCTACGATCCCACACGCGACACGATCCTCAATCCCATGGACGCGCGCTGCCCGGCCTGGTCGATCT TCAACGATTGCCGCACCCACAGCGAATTCACGGCCGCCGCGGCGGCGCTAATCCCTTCGGATGGCGGTTC GTCCGAACCCTTCTGGGCGCTCGCAGCGCGCACCCTCTTCATCGAGATGTGCATTCGCCTGATGGAGCGG GGGCAGACCAGCAATCTGGCGCTGTCCGAGAACCTGATGACGGCCGACCTGAAGCGCGTCCACCGCTTCC TCGCCAACACCATCGCCGACCCGCTCACTGCCCCCGAAGCGGCCCGCATGGCGGAATCGATCCGCGCCGT CTTCAACACCAATGCGCAGGTCCTTCGCTTCCTTCCCGACGAGGGCGAATCCTTCTCGATCCGCGACTGG ATCACGCGGGACAAGAAGCCCGGATCGATCCTGTTCGTGACGTCGAACTATGTCGATCTGCCGATGAACC GGGCGCTGCTCACGCTGTGGATGGATCTCGCGATCAACCGGCTGATGACGCTGCCGCGCACCCGCAGCTT GCGCACCTGGTTCATGTTCGACGAGCTTGGCGCACTGCATCGCCTTCCGGCGATCGAGAATGGTCTCCAG ACGGCGCGCGCGTTTGGCGGCGCGATGATCCTGGGCATCCACAGCTTCGAGAAGCTGGTCGAAGTCTATG GCGAGCAAGGGGCACGCAATCTCGCCTCGCTCGCCCGCTCCAAGCTCATCCTCGCGACGGCCGATCTCGA CACGGCCGAGCAGTGCGCGCGCTACATCGGCAACCGCGAGGTTCGCCAGATGGATGAGGCCTATAGCTAC GGCTACAATAACACCCGCGACGCTTCGACCCTGACCCCGCGCAAGCAGGTCGAACCACTCGTCATCGCCG ATGACATCACCAACCTGCCCTCGATGCACGGCTTCGTGAAATTCCCCGACGGCTTCCCCGCCGCGCGCAT CCTGCTCGAGTGGAAGGACTATCCCCAGGTCGCCCAGGGCTTCGTCCAACGGCCCGATGTCGGGCCGGTA CGCTCAAGGCGCGGAGAGGAGGTGTTCGAGGAAGACGGGGCAGGGGAGGCGGGCGGGCGCGACGGCTCGT TGCAGGTCGTGGAGGAAGTGGCCGAGATCACCAATCTCGCCCGCGATCTCGCCGCACGGATCCTGTCGGC CGAGGTCGAGGAGGAGGACGATGCCGCCCGCCGCGCGGCGCAGCGGGCGGACGACCGGGACGAACAGGCG ACGCCTGGCACGCATAGCGCGGACAGGGCGCAGGCGGCGCGCGCCAGCGGCGAGGAACAGCCGGTTTCCG CGCGCGACCGGGACGATCGTCGTGATGGCCACCGGCACGGGGAGACGAGCCCACAGGTCGAGGACCAGAC CCTGATCGAGCTGCGCCACGACTTCTCCACCGGCCGCGAGGATGACGGCATGGACATGGGCATCTGA |