| Protein ID: 134047236 |
 T4SS name [ID] | Tra_F [586] |
| Gene symbol | traD |
| Locus tag | SNSL254_pSN254_0066 |
| Strain | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
| Replicon | plasmid pSN254 [GenBank: NC_009140] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 49378..51243 [+] |
| Product | type IV conjugative transfer system protein TraD |
| Component type | TraD_F |
| UniProt ID | A4IVE1 |
| KEGG ID | see:SNSL254_p_0066 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | AAA_10 [PF12846], Evalue: 4e-19, Aligned region: 173..549 TrwB_AAD_bind [PF10412], Evalue: 2.7e-17, Aligned region: 167..211 TrwB_AAD_bind [PF10412], Evalue: 2.7e-17, Aligned region: 469..609 TraG-D_C [PF12696], Evalue: 4.1e-13, Aligned region: 471..595 DUF87 [PF01935], Evalue: 1.2e-06, Aligned region: 173..211 FtsK_SpoIIIE [PF01580], Evalue: 1.2e-05, Aligned region: 168..211 |
| Protein Sequence: 621 a.a. [Download] |
| >gi|134047236|ref|YP_001101945.1| type IV conjugative transfer system protein TraD [Salmonella enterica subsp. enterica serovar Newport str. SL254] MTMSYDPLAYEMPWRPNYEKNAVAGWLAASGAALAVEQVSTMPPEPFYWMTGICGVMAMARLPKAIKLHL LQKHLKGRDLEFISIAELQKYIKDTPDDMWLGSGFLWENRHAQRVFEILKRDWTSIVGRESTVKKVVRKI QGKKKELPIGQPWIHGVEPKEEKLMQPLKHTEGHSLIVGTTGSGKTRMFDILISQAILRGEAVIIIDPKG DKEMRDNARRACEAMGQPERFVSFHPAFPEESVRIDPLRNFTRVTEIASRLAALIPSEAGADPFKSFGWQ ALNNIAQGLVITHDRPNLTKLRRFLEGGAAGLVIKAVQAYSERVMPDWEAEAAAYLEKVKNGSREKIAFA LMKFYYDIIQPEHPNSDLEGLLSMFQHDQTHFSKMVANLLPIMNMLTSGELGPLLSPDSSDLSDERQITD SAKIINNAQVAYLGLDSLTDNMVGSAMGSIFLSDLTAVAGDRYNYGVNNRPVNIFVDEAAEVINDPFIQL LNKGRGAKLRLFVATQTFADFAARLGSKDKALQVLGNINNTFALRIVDGETQEYIADNLPKTRLKYVMRT QGQNSDGKEPIMHGGNQGERLMEEEADLFPAQLLGMLPNLEYIAKISGGTIVKGRLPILTQ |
| Nucleotide Sequence: 1866 bp [Download] |
| >gi|134047083|ref|NC_009140.1|:49378-51243 Salmonella enterica subsp. enterica serovar Newport str. SL254 plasmid pSN254, complete sequence ATGACAATGAGTTATGACCCGCTCGCCTACGAGATGCCGTGGCGGCCCAACTATGAAAAAAATGCTGTAG CAGGCTGGCTTGCCGCCTCCGGCGCGGCTTTGGCCGTAGAGCAAGTCAGCACGATGCCTCCGGAGCCCTT CTATTGGATGACGGGGATCTGTGGCGTGATGGCGATGGCTCGTTTGCCAAAGGCTATCAAACTTCACCTG CTCCAAAAGCATTTGAAGGGGCGTGATCTGGAGTTTATTTCTATTGCGGAGCTCCAAAAGTACATCAAGG ACACGCCGGACGATATGTGGCTTGGTAGTGGGTTCCTGTGGGAAAACCGCCATGCCCAGCGCGTGTTTGA GATCCTGAAACGCGACTGGACTTCCATCGTAGGGAGAGAGTCCACGGTCAAAAAGGTTGTCCGGAAGATA CAGGGTAAGAAAAAGGAGCTGCCAATCGGCCAGCCCTGGATTCACGGGGTAGAACCCAAAGAAGAGAAGC TGATGCAGCCACTCAAGCACACTGAGGGGCATTCGCTGATCGTTGGGACCACCGGCTCGGGCAAGACCCG TATGTTCGACATCCTGATTTCACAGGCCATTCTGCGTGGGGAAGCCGTGATCATCATAGACCCGAAAGGG GATAAGGAGATGCGGGACAATGCACGACGTGCCTGTGAAGCTATGGGGCAGCCGGAAAGATTCGTCTCAT TTCATCCAGCATTCCCGGAAGAGTCGGTGCGTATCGACCCTCTGCGTAACTTCACCCGCGTGACTGAAAT TGCAAGTCGTTTGGCAGCGTTGATCCCGTCCGAAGCAGGGGCCGACCCGTTCAAATCATTTGGATGGCAG GCACTGAACAACATCGCTCAGGGCTTGGTCATCACTCATGATCGTCCCAACCTGACAAAGCTCCGCCGAT TCCTTGAAGGTGGCGCTGCTGGCTTGGTCATCAAGGCCGTTCAGGCTTACTCAGAGCGAGTTATGCCCGA CTGGGAGGCAGAAGCAGCGGCTTATTTGGAGAAAGTCAAAAACGGTTCGCGTGAGAAGATCGCTTTCGCG TTGATGAAGTTCTACTACGACATCATCCAACCTGAGCACCCAAACTCTGATCTGGAAGGCTTGCTGTCGA TGTTCCAGCACGACCAAACCCACTTCTCCAAGATGGTGGCGAACCTCCTGCCGATCATGAATATGCTGAC GTCCGGGGAGCTAGGCCCTCTGCTGTCTCCAGACTCATCTGATCTGAGCGACGAACGCCAGATCACTGAT TCCGCAAAAATCATCAACAACGCTCAAGTTGCTTATCTGGGGCTCGACTCCCTGACCGACAACATGGTTG GTAGTGCTATGGGGTCCATCTTCCTGTCAGACCTGACAGCGGTTGCCGGTGACAGATACAACTACGGCGT CAACAACAGACCCGTAAATATCTTTGTTGATGAGGCTGCTGAGGTGATCAACGACCCGTTCATCCAGCTC CTGAACAAAGGTCGCGGTGCGAAACTTCGTCTTTTCGTTGCAACTCAGACTTTTGCTGACTTCGCAGCTC GACTGGGTAGCAAAGACAAAGCGCTCCAAGTGTTGGGGAACATCAACAACACGTTTGCTCTGCGTATCGT CGATGGTGAAACACAGGAGTATATCGCAGATAACTTGCCGAAGACCCGGCTCAAGTACGTCATGCGGACT CAAGGCCAGAACTCGGATGGCAAGGAGCCCATTATGCACGGAGGCAACCAAGGCGAGCGTTTGATGGAGG AGGAAGCTGATCTGTTCCCAGCCCAGTTATTGGGAATGCTTCCGAACCTGGAATACATAGCCAAAATTTC AGGCGGAACAATCGTAAAAGGCCGTCTGCCCATATTGACCCAGTAA |