| Protein ID: 10956918 |
 T4SS name [ID] | Tra_F [526] |
| Gene symbol | traD |
| Locus tag | pNL1_p090 |
| Strain | Novosphingobium aromaticivorans plasmid pNL1 (NC_002033) |
| Replicon | plasmid pNL1 [GenBank: NC_002033] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 90847..93177 [+] |
| Product | Conjugal DNA metabolism |
| Component type | TraD_F |
| UniProt ID | O85919 |
| KEGG ID | NA |
| PDB ID | NA |
| Domain hit(s) vs Pfam | TrwB_AAD_bind [PF10412], Evalue: 1.3e-141, Aligned region: 226..610 T4SS-DNA_transf [PF02534], Evalue: 3.6e-21, Aligned region: 237..396 T4SS-DNA_transf [PF02534], Evalue: 3.6e-21, Aligned region: 431..595 TraG-D_C [PF12696], Evalue: 2.9e-19, Aligned region: 470..591 AAA_10 [PF12846], Evalue: 5.5e-13, Aligned region: 240..282 AAA_10 [PF12846], Evalue: 5.5e-13, Aligned region: 443..546 |
| Protein Sequence: 776 a.a. [Download] |
| >gi|10956918|ref|NP_049138.1| Conjugal DNA metabolism [Novosphingobium aromaticivorans] MRRPDTWSDQARPGQLKHHSARGNMPRNAGNFTRGSQLITHEFLMWFSSAKMPLLVWFFTFLIALSIVLA LLLHEHEVQMILMRIYAEGWSFMEFSPRKILNLTLPSGRVIPAPVSMIASHPDVVIAWNKLMRAIWGSLF ISLFVAVPLSVWFIDLSRKRGKAILEERHQRGAMLVDAKELAAVINQHNSAALAQEIAERMPGKTMDDVM KMSFAERKAAGIHHVYNIAGVSFPWRSEQAHTIMIGSTGTGKTTQMRDMIAQMRVRQDRAVVFDLTGAYV EAFYNPETDTILNPMDERCPSWSLFDEGKNYADFTAIASAILPTDGGGSDPFWMLGARTLFVQTCVQLMK LGQATNAALAYRLMMADLEEVHELLRNTIAEPLTAPVAARMAESVRAVLNTNAQALLFIPEGKEPFSICD WIRHQDKPGSILFITSSHNELVLNRALLSLWMNLAVHTLMRLPRTRSLRTWFFFDEVHALHRLPAIEDGL QTARGFGGAFVLGIHSFAKLAETYGKEGAQNLASLARTKLILAAADRDTAEHCSDYIGHREVRMMDEAYS YGYSNIRDAATITPRSEVQPLVIPDDIMRLPSLRGFLVFPEGFDAARIRLTYKDYPKVAEGYILRENVEP IEFISMPKGDDEVAETGGRDRSGEPELEPRGEDLGRDPAVPLSPALEPDANAPEIMPDGPNPDPSVGKQM AFRLEQAPQNERTNSREQDPSQKAEKSSASKPAAQRTVGSRELNDPAIPDKESERGAKTAKGIEDQSHSR DDGPEL |
| Nucleotide Sequence: 2331 bp [Download] |
| >gi|10956828|ref|NC_002033.1|:90847-93177 Novosphingobium aromaticivorans plasmid pNL1, complete sequence ATGCGTCGTCCTGACACCTGGTCCGATCAGGCCCGCCCCGGCCAGCTCAAGCACCATTCGGCGCGCGGGA ACATGCCGCGCAACGCGGGCAATTTCACTCGCGGCTCGCAGCTCATCACGCACGAATTCCTGATGTGGTT TTCCTCGGCGAAGATGCCGCTGCTGGTGTGGTTCTTCACGTTCCTGATCGCGCTCTCGATCGTCCTCGCG CTGCTGCTTCACGAGCATGAAGTGCAGATGATCCTGATGCGGATCTATGCGGAGGGATGGAGCTTCATGG AGTTCAGCCCGCGCAAGATCCTCAACCTAACCTTGCCCTCCGGCCGCGTGATCCCTGCCCCCGTTTCGAT GATCGCCAGCCACCCTGATGTCGTCATCGCCTGGAACAAGCTGATGCGCGCAATTTGGGGTTCGCTGTTC ATCTCGCTGTTCGTCGCGGTGCCGCTTTCGGTCTGGTTCATCGACCTCTCGCGCAAGCGCGGCAAGGCGA TCCTCGAAGAACGCCACCAGCGCGGCGCGATGCTGGTCGACGCCAAGGAGCTTGCCGCCGTGATCAACCA GCACAACAGCGCCGCGCTTGCCCAGGAGATTGCCGAACGGATGCCCGGCAAGACCATGGACGACGTCATG AAAATGAGCTTTGCCGAGCGCAAGGCCGCCGGCATCCACCACGTCTACAACATCGCCGGCGTATCGTTTC CGTGGCGGAGCGAACAGGCTCACACGATCATGATCGGGTCGACCGGGACCGGCAAGACCACGCAGATGCG GGACATGATCGCGCAGATGCGCGTGCGCCAGGATCGGGCGGTCGTGTTCGATCTTACCGGGGCCTACGTC GAGGCGTTCTATAACCCCGAGACCGACACGATCCTCAACCCGATGGACGAGCGCTGCCCGAGCTGGTCGC TGTTCGACGAGGGCAAGAACTACGCCGACTTCACCGCGATCGCATCAGCCATCTTGCCGACCGACGGCGG CGGCTCGGACCCCTTCTGGATGCTGGGAGCAAGGACATTGTTTGTGCAGACCTGCGTCCAGCTCATGAAG CTCGGCCAGGCGACCAACGCCGCACTCGCCTACCGGCTGATGATGGCCGACCTTGAAGAGGTCCACGAAC TGCTTCGCAATACCATTGCCGAGCCGCTGACCGCGCCAGTCGCGGCGCGCATGGCCGAGTCTGTCCGTGC AGTTCTCAACACCAATGCCCAGGCCTTGTTGTTTATTCCCGAAGGCAAGGAACCCTTCTCGATTTGCGAC TGGATTCGCCACCAGGACAAGCCGGGCTCGATCCTGTTCATTACCTCTTCGCATAACGAACTGGTGCTCA ACCGGGCGCTCTTGTCGCTGTGGATGAACCTTGCGGTGCATACCCTGATGCGGCTGCCGCGCACCCGGTC ATTGCGCACCTGGTTCTTCTTCGACGAAGTCCATGCGCTGCACCGCCTGCCAGCGATCGAAGACGGCTTG CAGACTGCGCGCGGCTTTGGCGGCGCCTTCGTGCTCGGCATCCATTCCTTCGCCAAGCTAGCCGAGACCT ATGGCAAGGAAGGCGCGCAGAACCTTGCCTCGCTGGCCCGCACCAAGCTGATCCTGGCAGCGGCCGATCG CGACACCGCCGAGCACTGCTCGGACTACATTGGTCACCGCGAAGTGCGGATGATGGATGAGGCCTACAGC TACGGCTATTCCAACATCCGCGACGCCGCGACCATTACCCCGCGCTCGGAAGTGCAGCCGCTGGTGATCC CCGATGACATCATGCGCCTGCCTTCGCTGCGCGGGTTCCTGGTCTTTCCGGAAGGGTTCGATGCGGCGCG GATCAGGCTCACCTACAAGGACTACCCCAAGGTCGCAGAGGGCTACATTCTGCGCGAGAACGTCGAGCCT ATCGAGTTCATCTCCATGCCCAAGGGTGACGATGAAGTCGCCGAGACCGGCGGCCGGGACCGCAGCGGCG AACCGGAACTGGAGCCGCGCGGCGAAGACCTTGGGCGCGACCCCGCAGTGCCGTTGTCACCGGCGCTCGA GCCCGACGCCAATGCGCCGGAAATCATGCCCGATGGACCAAATCCTGATCCCAGTGTCGGCAAGCAGATG GCATTTCGTCTGGAGCAAGCGCCTCAGAACGAACGCACCAATAGCCGCGAGCAGGACCCGAGTCAGAAGG CTGAAAAGAGTTCCGCGTCCAAGCCTGCCGCGCAGCGCACCGTCGGGTCCCGCGAACTCAATGACCCCGC CATCCCCGACAAGGAATCTGAGCGCGGCGCGAAGACCGCCAAGGGGATCGAGGACCAATCGCATTCCCGT GACGACGGACCGGAGCTCTAG |