oriTDB
The information of the oriT region
oriTDB accession number 100991
Name oriT_pMKFS47-II  insolico
Sequence Completeness core
oriT length 37 nt
oriT sequence TACGCAGAAACGAAGTTACTGCGTATAAGTGCGCCCT
IR (inverted repeat)[1-11] [15-25] nt  (TACGCAGAAAC..GTTACTGCGTA)
Location of nic site [32-33] nt
Conserved sequence flanking the
  nic site 		TAAGTGC|GCCCT
Note predicted by the oriTfinder
L:1-11;R:15-25;D:32-33
Visualization of oriT structure
Reference
 N/A
I. Information of Relaxase
ID 1061
Name MobA_pMKFS47-II insolico
GenBank accession number WP_047916715
Family MOBQ
Length 656 aa
UniProt ID A0A0D6DZV3
PDB ID _
Pfam MobA_MobL [PF03389.14], Evalue: 3.10E-63, Aligned region: 18..242
Note putative relaxase
Protein sequence [Download] MAIFHLSMTIAKREGGKRSLIAMASYRSGEKLYSELYEKTSLYNHRLVQPEAFIMKPDFV
PSEFSNREFLWNKMELSEKSANAQLCRELNVALPIELNKDDQKLLIKEFVKDNFISDGMI
ADVAIHRDDENNPHAHIMLSMREVDSEGNILNKSCRIPKLDEEGNQVYNEKGHKVTVSVK
TNNWNRKTFVSEIRTDWAKKVNHYLKERNIDQQITEKSHAELGKKELPSIHEGSYSNRLS
SKGITSDLKLKNSDIQDFNAILSELDKLEKQEEILKNDKSFTLKFEKSFSPLEKKELKNL
SKELKIFINDDNIEKRISELKRWENSLIFDNKMELQTQRIMLNKVNDEREMLLKANEVLD
KQADRFFKKSYPILNTDKFSKSEIRAMVNETIFRKQLLNKDQLAEVIYNERVVEQEENKK
IFKERPFQTSRYIDTKIKQIDESISSETNPQIKEVLSVKKEKLLGIKEGLIDYVQSEVSI
KFDKNVSIDTVIEGEMLLAKSEYYKTTDFSKIEGVARFTSDEINSMLEQSKGYIGYIQSA
KIPNDCQGVFFVQDSMKHLDKLSPLAKNNLKKIVNHNAYLPERDKVELSSKLEKTENIDT
EEPEKPGMNVTMFQLAKSINRLVSGNVPQKKRNLDKLIKQTKAKENQTLQRNIPLR
Reference
 N/A

II. Auxiliary DNA-binding protein(s) of the relaxosome
 N/A
 N/A
Information of plasmid
ID 1449
Plasmid name pMKFS47-II
GenBank accession number NZ_LN774770.1
Genome size 55671 bp
Coordinate of oriT  [Strand] 33121..33157 [+]
Drug resistance _
Heavy-metal resistance _
Virulence factor _
Xenobiotic degradation _
Host bacterium [NCBI Taxonomy ID] Lactococcus piscium MKFS47 [297352]
Reference
 N/A

Microbial Bioinformatics Group in MML, SJTU