oriTDB
The information of the oriT region
oriTDB accession number 100952
Name oriT_pWSM1497  insolico
Sequence Completeness core
oriT length 34 nt
oriT sequence GAGGGAGGGCGCGCTTATACGTCGTGCCGACGTG
IR (inverted repeat)[19-24] [28-33] nt  (ACGTCG..CGACGT)
Location of nic site _
Conserved sequence flanking the
  nic site 		_
Note predicted by the oriTfinder
L:19-24;R:28-33
Visualization of oriT structure
Reference
 N/A
I. Information of Relaxase
ID 1022
Name TraA_pWSM1497 insolico
GenBank accession number WP_064994117
Family MOBQ
Length 1015 aa
UniProt ID A0A1W6XHL5
PDB ID _
Pfam MobA_MobL [PF03389.14], Evalue: 5.10E-69, Aligned region: 17..217
AAA_30 [PF13604.5], Evalue: 9.50E-57, Aligned region: 351..540
AAA_19 [PF13245.5], Evalue: 2.50E-07, Aligned region: 356..483
Note putative relaxase
Protein sequence [Download] MAIYHLHVKVIGRKAGSSAVASAAYRSASRLRAERIDRTHNFSAKRGVVHSEVMLPENAP
EAWRDRERLWNDVEAFEVRKDAQLAREVEFALPRELSQAQGIELARDFVEAEFVSRGMVA
DLNVHWDRAEDGSPKPHAHVILTMRAVDANGFGSKVRDWNATQLVERWRERWAELANERL
AELDIDARIDHRSLEAQGIALEPQTQIGAPAQRIEGSGLAAGDSEADRAELHREIARNNG
ARIIADPSVALDAITHQQSTFTRKDIAKFSHRHSDGMEQFNEVVVAISNAPDLVELGKDG
RGEDRFTTRQMIETEQRLHRAAERIDLDERHAVSDAHREAALARAAQRGLILSEEQSDAL
AHITDGRGLGVVVGFAGTGKSAMLGVARQAWAAAGYEVRGAALSGIAAENLESGSGIPSR
TIASMEHGWGQGRDLLTARDVLVIDEAGMVGTRQLERVLSHAADAGAKVVLVGDPQQLQA
IEAGAAFRSIHERHGGVEIGQVRRQSEDWQRDATRDLATGRIGAAISAYDAQGMVHHAAT
RDAARSELVERWDRDRQAHPEASRIILTHTNDEVRALNQAARERMRAAGDLGEDVQVNVE
RGPRNFASGDRVMFLRNERGLGVKNGTLGIVEEVSTQSIAVRTDDDRSVRFDLKDYAHID
HGYAATIHKAQGMTVARTHVLATPGMDAHGSYVALSRHRDRMELHYGGDDFANRERLVRT
LSRNRAKDMASDYEQIDPAQSYAERRGITFRERVVEIVRRIVPEKLRDRIGEFLDGLRSP
ADAEPGNDRGRGPERENVGALSADGGAAPERDVSVRGAQRDTDAAVSPEAALRRARTNAL
VRHARAIDAILSSGNVDGQGSPEQMRELRDARSAFEKVRPHGWRDAEAAYVKNPELLREA
GAGRVNRIVLALQLETEIRTGLDSDPAGRAERFVEHWQKLHRTSQDQYQAGDMSGYKSTR
LAMSNMAKSLERDPQLESLLANRKRELGINVESGRRFGAELAFNHGIGRGRGIGI
Reference
 N/A

II. Auxiliary DNA-binding protein(s) of the relaxosome
 N/A
 N/A
Information of plasmid
ID 1410
Plasmid name pWSM1497
GenBank accession number NZ_CP021071.1
Genome size 531629 bp
Coordinate of oriT  [Strand] 273432..273465 [-]
Drug resistance _
Heavy-metal resistance _
Virulence factor _
Xenobiotic degradation _
Host bacterium [NCBI Taxonomy ID] Mesorhizobium sp. WSM1497 [278153]
Reference
 N/A

Microbial Bioinformatics Group in MML, SJTU