oriTDB
The information of the oriT region
oriTDB accession number 100945
Name oriT_pFDAARGOS_205-2  insolico
Sequence Completeness incomplete
oriT length 55 nt
oriT sequence GTAATGCCCACTTATCAGTTTCTCTTCGAGAAACTGGTGGGCAAGCGTACCGCTT
IR (inverted repeat)IR1: [16-24] [28-36] nt  (CAGTTTCTC..GAGAAACTG)
IR2: [43-47] [51-55] nt  (AAGCG..CGCTT)
Location of nic site _
Conserved sequence flanking the
  nic site 		_
Note predicted by the oriTfinder
L:16-24;R:28-36;L:43-47;R:51-55
Visualization of oriT structure
Reference
 N/A
I. Information of Relaxase
ID 1015
Name Mob_pFDAARGOS_205-2 insolico
GenBank accession number WP_032490546
Family MOBQ
Length 478 aa
UniProt ID Q84AT6
PDB ID _
Pfam MobA_MobL [PF03389.14], Evalue: 2.40E-28, Aligned region: 9..222
Note putative relaxase
Protein sequence [Download] MAIYHLNVRYCSKSKGQSAQAKNDYINRNDKYSKRLDDLQFSGYGNMPKFAEDNPQEFWR
LSDIYERANARVCTEIEFALPRELTLEQQQKLVSSFIENTVDSGSNKLPYSFAIHTDKNN
HNPHCHLIFSERQLDGIDRTAEQFFKRANTKSPEKGGAMKTADFRDREFIQSVRKTWREQ
ANQALEQYGYAARIDERSYKEQGIEQAPRARIDRVTWQELNRLEQEERQIVQELALKGQE
INKEKSYLQKIEEKQAQGMGKYESKFAAAFSKLSESALKHDLSNEKEKDSKIHTQEEKVP
QNRIQGLSQADFDQFLIDEWLPQIEKYVKAQEKRDGMEVEITQYDKDLQRIQGDYNKLTD
KNQGFLGLWETKEQKAKKKELEDEYKHTAEQRNAKSQELAEYSQKIKAYEQKTLEPINEK
IAKYQADNPEIKMRSLGFVKKIKAQGAYKAAQERMEREKQHQQEKQQRHLERESGLSL
Reference
 N/A

II. Auxiliary DNA-binding protein(s) of the relaxosome
 N/A
 N/A
Information of plasmid
ID 1403
Plasmid name pFDAARGOS_205-2
GenBank accession number NZ_CP020417.1
Genome size 7450 bp
Coordinate of oriT  [Strand] 5770..5824 [+]
Drug resistance _
Heavy-metal resistance _
Virulence factor _
Xenobiotic degradation _
Host bacterium [NCBI Taxonomy ID] Neisseria gonorrhoeae FDAARGOS_205 [485]
Reference
 N/A

Microbial Bioinformatics Group in MML, SJTU