oriTDB
The information of the oriT region
oriTDB accession number 100761
Name oriT_pATCC_43650  insolico
Sequence Completeness core
oriT length 38 nt
oriT sequence CTTTATGGAATAAAGTATAGTGTGCTATACTTTACATG
IR (inverted repeat)[1-8] [9-16] nt  (CTTTACGA..TAGTAAAG)
Location of nic site [25-26] nt
Conserved sequence flanking the
  nic site 		GTG|CTA
Note predicted by the oriTfinder
L:1-8;R:9-16;D:25-26
Visualization of oriT structure
Reference
 N/A
I. Information of Relaxase
ID 833
Name Putative relaxase of pATCC_43650 insolico
GenBank accession number WP_082707471
Family MOBV
Length 347 aa
UniProt ID _
PDB ID _
Pfam Mob_Pre [PF01076.18], Evalue: 3.40E-66, Aligned region: 1..185
Note putative relaxase
Protein sequence [Download] MQKMKSPDLKGMQFHNQRERESRTNPDIDPDREHLNYDLLHQEKIDYNKHVKEIIESQKV
SERKTRKDAVLVNELLVTSDRKFFDGLDLAEQKRFFEESYKLFSERYGKQNIAYATVHND
EKTPHMHLGVVPMRDGKLQGKNIFNRQELQWMQEEFPKHMQSVGFDVERGIASDRKHIEM
SRFKALTLNEEIKTLEKETEVLRNALTASKKVDELQVSKPSLFDRNHVKLPVEDFEALKA
RAKATEAIERTIEAHEKRFDEMIDNVIDSDRKLDQEKVKTAQLQKENKELKKENQELQKE
NKTLKSQLNVLLEFAKSQLEKFKEWQKERQQEKEKNIARKRDQELER
Reference
 N/A

II. Auxiliary DNA-binding protein(s) of the relaxosome
 N/A
 N/A
Information of plasmid
ID 1221
Plasmid name pATCC_43650
GenBank accession number NZ_CP013660.2
Genome size 13524 bp
Coordinate of oriT  [Strand] 8616..8653 [-]
Drug resistance _
Heavy-metal resistance _
Virulence factor _
Xenobiotic degradation _
Host bacterium [NCBI Taxonomy ID] Planococcus kocurii ATCC 43650 [1374]
Reference
 N/A

Microbial Bioinformatics Group in MML, SJTU