oriTDB
The information of the oriT region
oriTDB accession number 100367
Name oriT_pWZ1668  insolico
Sequence Completeness incomplete
oriT length 47 nt
oriT sequence GTCATAGAATAATTCTTTGTTTTCTTCAATCGATTCAATAGAAATAT
IR (inverted repeat)IR1: [3-10] [12-19] nt  (CATAGAAT..ATTCTTTG)
IR2: [25-31] [32-38] nt  (TTCAATC..GATTCAA)
Location of nic site _
Conserved sequence flanking the
  nic site
_
Note predicted by the oriTfinder
L:3-10;R:12-19;L:25-31;R:32-38
Visualization of oriT structure
Reference
 N/A
I. Information of Relaxase
ID 438
Name Nickase_pWZ1668 insolico
GenBank accession number YP_003864133
Family MOBQ
Length 654 aa
UniProt ID E0X5B7
PDB ID _
Pfam MobA_MobL [PF03389.14], Evalue: 4.10E-67, Aligned region: 11..235
Note putative relaxase
Protein sequence [Download] MTIAKREGGKRSLIAMASYRSGEKLYSELYEKTNLYNHRTVKPEAFILKPDYVPNEFLDR
QTLWNKMELAEKSPNAQLCREVNVALPIELNNSDQRMLIEDFVKDNFVSEGMIADVAIHR
DDENNPHAHIMLTMREVDSEGNILNKRKRIPKLDENGNQIFNEKGQRVTVSIKTNDWDRK
SLVSEIRKDWADKVNQYLKDRNIDQQITEKSHAELGKKELPTIHEGFYSKKLEDKGVISE
LKRKNLEIQSYNDVLSELDKLENQEKVLKQDQNFTLKFEKTFSPLEKKELKNLSKELKIF
VNDENIDKRISELKRWENSLIFNNKMEIQKQRLMLSKISSERDMLTKANEILDKQAERFF
KKSYPSLNIDKFSNHEVRAMVNETIFRKQLLNKDQLAEVIYNERVVEKEESKKIFKEKPF
QTSRYLDSKIKQVEDSITKENNPERKEILSIKKEKLIGIKQGLIEYVQSEVERKFDKNVS
IDSVIEGEMLLAKADYYKTTDFSKVEGVARFSSEEINSMLEQSKGFLTNIQTVKIPNDCQ
GVFFVQDSMKHIDELSPLAKHNLKKVVNRNAYLPDSDKIELSKEIENTNKDQSQELDKDV
PEKNEVTVKMFQFAKSINRLLSGNQLQKKRNLDKLIKQTKAKENQSLQRNIPLR
Reference
 N/A

II. Auxiliary DNA-binding protein(s) of the relaxosome
 N/A
 N/A
Information of plasmid
ID 828
Plasmid name pWZ1668
GenBank accession number NC_014475.1
Genome size 48365 bp
Coordinate of oriT  [Strand] 35503..35549 [+]
Drug resistance _
Heavy-metal resistance _
Virulence factor _
Xenobiotic degradation _
Host bacterium [NCBI Taxonomy ID] Enterococcus faecalis [1351]
Reference
[1] Zhu W et al (2010) Dissemination of an Enterococcus Inc18-Like vanA plasmid associated with vancomycin-resistant Staphylococcus aureus. Antimicrob Agents Chemother. 54(10):4314-20. [PMID:20660665]