oriTDB
The information of the oriT region
oriTDB accession number 100337
Name oriT_SAP068A  insolico
Sequence Completeness core
oriT length 36 nt
oriT sequence CACGCGAACGGAACGTTCGCATAAGTGCGCCCTTAC
IR (inverted repeat)[4-10] [14-20] nt  (GCGAACG..CGTTCGC)
Location of nic site [31-32] nt
Conserved sequence flanking the
  nic site 		TAAGTGCGCC|CT
Note predicted by the oriTfinder
L:4-10;R:14-20;D:31-32
Visualization of oriT structure
Reference
 N/A
I. Information of Relaxase
ID 408
Name Nickase_SAP068A insolico
GenBank accession number YP_006938308
Family MOBQ
Length 665 aa
UniProt ID O87361
PDB ID 4HTE
Pfam MobA_MobL [PF03389.14], Evalue: 7.70E-55, Aligned region: 17..218
Note putative relaxase
Protein sequence [Download] MAMYHFQNKFVSKANGQSATAKSAYNSASRIKDFKENEFKDYSNKQCDYSEILLPNNADD
KFKDREYLWNKVHDVENRKNSQVAREIIIGLPNEFDPNSNIELAKEFAESLSNEGMIVDL
NIHKINEENPHAHLLCTLRGLDKNNEFEPKRKGNDYIRDWNTKEKHNEWRKRWENVQNKH
LEKNGFSVRVSADSYKNQNIDLEPTKKEGWKARKFEDETGKKSSISKHNESIKKRNQQKI
DKMFNEVDDMKSHKLNAFSYMNKSDSTTLKNMAKDLKIYVTPINMYKENERLYDLKQKTS
LITDDEDRLNKIEDIEDRQKKLESINEVFEKQAGIFFDKNYPDQSLNYSDDEKIFITRTI
LNDRDVLPANNELEDIVKEKRIKEAQISLNTVLGNRDISLESIEKESNFFADKLSNILEK
NNLSFDDVLENKHEGMEDSLKIDYYTNKLEVFRNAENILEDYYDVQIKELFTDDEDYKAF
NEVTDIKEKQQLIDFKTYHGTENTIEMLETGNFIPKYSDEDRKYITEQVKLLQEKEFKPN
KNQHDKFVFGAIQKKLLSEYDFDYSDNNDLKHLYQESNEVGDEISKDNIEEFYEGNDILV
DKETYNNYNRKQQAYGLINAGLDSMIFNFNEIFRERMPKYINHQYKGKNHSKQRHELKNK
RGMHL
Reference
 N/A

II. Auxiliary DNA-binding protein(s) of the relaxosome
 N/A
 N/A
Information of plasmid
ID 798
Plasmid name SAP068A
GenBank accession number NC_013338.1
Genome size 50500 bp
Coordinate of oriT  [Strand] 4119..4154 [-]
Drug resistance insolico teicoplanin resistance
Heavy-metal resistance _
Virulence factor _
Xenobiotic degradation _
Host bacterium [NCBI Taxonomy ID] Staphylococcus aureus PM64 [1280]
Reference
 N/A

Microbial Bioinformatics Group in MML, SJTU