oriTDB
The information of the oriT region
oriTDB accession number 100242
Name oriT_pLG13  insolico
Sequence Completeness intact
oriT length 82 nt
oriT sequence GGGTGTCGGGGCGCAGCCTGACCCAGTCACGTAGCGATAGCGGAGTGTATACTGGCTTAA CCATGCGGCATCAGTGCGGATT
IR (inverted repeat)[3-10] [17-24] nt  (GTGTCGGG..CCTGACCC)
Location of nic site [55-56] nt
Conserved sequence flanking the
  nic site 		CTGG|CTTA
Note predicted by the oriTfinder
L:3-10;R:17-24;D:55-56
Visualization of oriT structure
Reference
 N/A
I. Information of Relaxase
ID 313
Name MobA_pLG13 insolico
GenBank accession number NP_863577
Family MOBP
Length 517 aa
UniProt ID Q9F899
PDB ID _
Pfam Relaxase [PF03432.13], Evalue: 1.40E-19, Aligned region: 41..246
Note putative relaxase
Protein sequence [Download] MIVKFHARGKGGGSGPVDYLLGRERNREGATVLQGNPEEVRELIDATPFAKKYTSGVLSF
AEKELPPGGREKVMASFERVLMPGLEKNQYSILWVEHQDKGRLELNFIIPNMELQTGKRL
QPYYDRADRPRIDAWQTLVNHHYGLHDPNAPENRRILTLSDNLPETKQALAESVTRWIDA
LYHVGEIKGRQDVIQALTEAGIEVVRVTRSSISIADPNGGRNIRLKGAFYEQSFTDGRGV
REKAERESRIYRENAEQRVQEARRICKRGCDIKRDENQRRYSPVHSLDREIAGKTQGRGE
RGDDAAQEGRVKAGREYGHDVTGDSLSPVYREWRDALVSWREDTGEPGRNQEAGRDIAQT
EREDMGRGVCAGREQEISGPSVREISRGDSLSGERVGTSEGVTQNDRAGNTFAERLRAAA
TGLYAAAERMGERLRGIAEDVFAYATGQRDAERAGHAVESAGAALERADRTLEPVIQREL
EIREERLIQEREHALSLERERQLEIQERTLDGPSLGW
Reference
 N/A

II. Auxiliary DNA-binding protein(s) of the relaxosome
 N/A
 N/A
Information of plasmid
ID 704
Plasmid name pLG13
GenBank accession number NC_005019.1
Incompatibility group ColRNAI
Genome size 6293 bp
Coordinate of oriT  [Strand] 834..915 [-]
Drug resistance _
Heavy-metal resistance _
Virulence factor _
Xenobiotic degradation _
Host bacterium [NCBI Taxonomy ID] Escherichia coli LG74 [562]
Reference
 N/A

Microbial Bioinformatics Group in MML, SJTU