 oriTDB accession number | 100241 |
| Name | oriT_pAMalpha1  |
Sequence Completeness  | intact |
| oriT length | 261 nt |
| oriT sequence | CTGCTAGCCGGTGCTAGTAATGTGCTAATTTGGTGCTAAAAACCTGCTAGTCACTGCTAG GAATCTGCTAGTTTGGGTGCTAGAAACCTGCTATTGAGTGCTAAAAATGTGCTAGTTTAC CTGAAAGTACCTGCTAGTAAAGTGCTAGCGAAGAACGAAAGTGTACCCCACGGGAAAGCC TTGCACTGCAAGGCGGGGCACCTTGTGTGCCCCCCAGTTCCCCTTATGCTCTTCCGAAAC ACAGGAAGAAATTAAGCGAAT |
| IR (inverted repeat) | IR1: [178-185] [187-194] nt (GGGGCAC.GTGCCCC) |
| Location of nic site | _ |
| Conserved sequence flanking the nic site | _ |
| Note | predicted by the oriTfinder |
Visualization of oriT structure Reference| ID | 312 |
| Name | MobB_pAMalpha1 |
| GenBank accession number | NP_863352 |
| Family | MOBV |
| Length | 420 aa |
| UniProt ID | Q7B6N6 |
| PDB ID | _ |
| Pfam | Mob_Pre [PF01076.18], Evalue: 1.70E-73, Aligned region: 1..193 |
| Note | putative relaxase |
| Protein sequence [Download] | MSYAVCRMQKVKSAGLKGMQFHNQRERKSRTNDDIDHERTRENYDLKNDKNIDYNERVKE IIESQKTGTRKTRKDAVLVNELLVTSDRDFFEQLDPGEQKRFFEESYKLFSERYGKQNIA YATVHNDEQTPHMHLGVVPMRDGKLQGKNVFNRQELLWLQDKFPEHMKKQGFELKRGERG SDRKHIETAKFKKQTLEKEIDFLEKNLAVKKDEWTAYSDKVKSDLEVPAKRHMKSVEVPT GEKSMFGLGKEIMKTEKKPTKNVVISERDYKNLVTAARDNDRLKQHVRNLMSTDMAREYK KLSKEHGQVKEKYSGLVERFNENVNDYNELLEENKSLKSKISDLKRDVSLIYESTKEFLK ERTDGLKAFKNVFKGFVDKVKDKTAQFQEKHDLEPKKNEFELTHNREVKKERSRDQGMSL |
Reference| ID | 703 |
| Plasmid name | pAMalpha1 |
| GenBank accession number | NC_005013.1 |
| Genome size | 9759 bp |
| Coordinate of oriT [Strand] | 3553..3813 [+] |
| Drug resistance |  tetracycline resistance |
| Heavy-metal resistance | _ |
| Virulence factor | _ |
| Xenobiotic degradation | _ |
| Host bacterium [NCBI Taxonomy ID] | Enterococcus faecalis [1351] |
Reference| [1] Francia MV et al (2002) Amplification of the tetracycline resistance determinant of pAMalpha1 in Enterococcus faecalis requires a site-specific recombination event involving relaxase. J Bacteriol. 184(18):5187-93. [PMID:12193637] |