 oriTDB accession number | 100200 |
| Name | oriT_pL2  |
Sequence Completeness  | intact |
| oriT length | 463 nt |
| oriT sequence | TTAGTGGATGAACAAACAAAATACGAGAGATTTTTTGTTCGTTCATCCATGGTTTTAGAA AAAAGAGGGACGATTTCGGAAGAAGAAAATCGTCTCTTTTTTTCTTCTTTTTGTATGACA AAAAGAAAGATCTTTTGCCCATTTTATTTTTATAAAATGGGTAGGTGGCGTTTGCGTAAA GCAAATCGACACAATCCAAAGGGGATAAAAGGGGAAAGTGAAACTTCCCCCTTTTCAAGC CACATTGTAATACAAGAACGAAGTGCTTTGTATTACAATGTGATAGCTTGCAGTATTTAT GGTTTTATATGGTCTATTTTGTTGTGAGGATTGTAACCGAATAGGGCGCAATACTTATTA CAAAATAAATGACAAAGGGCGATTGAGGAATGAGCGCTGAGGCATTTTATCTTTGAGTAA GTTATTGATGGATCAGAAAAATGTATCACAAATTGAAACAAAG |
| IR (inverted repeat) | IR1: [138-147] [152-161] nt (CCCATTTTAT..ATAAAATGGG) IR2: [207-219] [223-235] nt (AAAAGGGGAAAGT..ACTTCCCCCTTTT) IR3: [241-255] [268-282] nt (CACATTGTAATACAA..TTGTATTACAATGTG) |
| Location of nic site | [290-291] nt |
| Conserved sequence flanking the nic site | CTTG|CA |
| Note | _ |
Visualization of oriT structure Reference| [1] Chang SM et al (2007) DNA sequence analysis of a cryptic plasmid pL2 from Lactococcus lactis subsp. lactis. Biotechnol Lett. 29(10):1519-27. [PMID:17563858] |
| ID | 193 |
| Plasmid name | pL2 |
| GenBank accession number | DQ917780.1 |
| Genome size | 5299 bp |
| Coordinate of oriT [Strand] | 4772..5234 [+] |
| Drug resistance | _ |
| Heavy-metal resistance | _ |
| Virulence factor | _ |
| Xenobiotic degradation | _ |
| Host bacterium [NCBI Taxonomy ID] | Lactococcus lactis BCRC 10791 [1360] |
Reference