 oriTDB accession number | 100103 |
| Name | oriT_pAsa3  |
Sequence Completeness  | incomplete |
| oriT length | 19 nt |
| oriT sequence | TACGGGTAGGCTGGCTTAA |
| IR (inverted repeat) | _ |
| Location of nic site | [14-15] nt |
| Conserved sequence flanking the nic site | CTGG|CTTA |
| Note | ColE2-type |
Visualization of oriT structure Reference| [1] Boyd J et al (2003) Three small, cryptic plasmids from Aeromonas salmonicida subsp. salmonicida A449. Plasmid. 50(2):131-44. [PMID:12932739] |
| ID | 98 |
| Name | MobA_pAsa3 |
| GenBank accession number | AAP69902 |
| Family | MOBP |
| Length | 555 aa |
| UniProt ID | Q7X2D9 |
| PDB ID | _ |
| Pfam | Relaxase [PF03432.13], Evalue: 1.60E-08, Aligned region: 35..254 |
| Note | mobilization relaxase |
| Protein sequence [Download] | MHIKFLAHGTGSGAHASAYLMGPHDHTGEPRAGVAVLRGDPVLFAAVADSLPFQQRYSSA VISWAAEEAPRPDEISAVLDDFEALAFAGLAREDVHLTAVEHAEADGGVHVHILIPRVHL GSGKSFNPAPPGQRKDFDAVRDKHNHEKGWARPDDPLRARLLRPDFEAYKAVTDHTAIKK QLTDHLIGAVAQGVVSNADELRAYLQEGLGCEITRTGKDYTSVKPEGYPKAIRLKGELYG ESWTAQSTLEREAQAAARAGIGRGGEVSASAARDAQERLAGAHQRRAEYNRDRYQGRDRG LAPADLRREQTLENSLEGGQGRSRHAETGLQRLVQSRAAGDFLRGGVTDGKLVWHELDMG ADRTRHGDVAEFAARDQQRPEHVGRVAEGGELLQGGGWKTLHHRPQDWGAVQDRGGQDGR GGALNDRAGAGTVGEAGADRTAARATNRGLEAAIAAASALFERVAKGVQRCAQELREAMQ RPARGDPDVAERGNALEQGYQRSARELEQQCQRLEQGAGELAERAGLINEQAKELKESKE LELSLEYERYRGLEL |
Reference| [1] Boyd J et al (2003) Three small, cryptic plasmids from Aeromonas salmonicida subsp. salmonicida A449. Plasmid. 50(2):131-44. [PMID:12932739] |
| # | ID | Name | GenBank | Length | Note |
| 1 | 141 | MobB_pAsa3 | AAP69903 | 185 aa | mobilization protein |
| 2 | 142 | MobC_pAsa3 | AAP69901 | 136 aa | mobilization protein |
| 3 | 143 | MobD_pAsa3 | AAP69904 | 102 aa | mobilization protein |
| ID | 98 |
| Plasmid name | pAsa3 |
| GenBank accession number | AY301065.1 |
| Genome size | 5616 bp |
| Coordinate of oriT [Strand] | 3437..3455 [-] |
| Drug resistance | _ |
| Heavy-metal resistance | _ |
| Virulence factor | _ |
| Xenobiotic degradation | _ |
| Host bacterium [NCBI Taxonomy ID] | Aeromonas salmonicida A449 [382245] |
Reference