The information of T4SS components from NC_010720 |
| Region 1: 121..9116 |
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| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | Ec53638_A0013 (traD) | 121..2364 [+], 2244 | 188574223 | conjugal transfer protein TraD | TraD_F | |
| 2 | Ec53638_A0014 | 2373..2771 [-], 399 | 188574266 | plasmid maintenance protein | | |
| 3 | Ec53638_A0015 | 2771..2998 [-], 228 | 188574254 | putative virulence-associated protein | | |
| 4 | Ec53638_A0016 (traI) | 3080..8350 [+], 5271 | 188574226 | conjugal transfer nickase/helicase TraI | TraI_F | |
| 5 | Ec53638_A0017 (traX) | 8370..9116 [+], 747 | 188574240 | conjugal transfer pilus acetylation protein TraX | TraX_F | |
| 6 | Ec53638_A0018 (finO) | 9171..9731 [+], 561 | 188574211 | conjugal transfer fertility inhibition protein FinO | | |
| 7 | Ec53638_A0019 | 9866..10078 [+], 213 | 188574201 | hypothetical protein | | |
| 8 | Ec53638_A0020 | 10263..10784 [+], 522 | 188574209 | nuclease homolog | | |
| 9 | Ec53638_A0021 | 10830..10949 [+], 120 | 188574203 | hypothetical protein | | |
| 10 | Ec53638_A0023 (insA9) | 11285..11680 [+], 396 | 188574178 | transposase InsA9 for IS1, orfB9 | | |
| 11 | Ec53638_A0024 | 12087..12236 [+], 150 | 188574245 | hypothetical protein | | |
| 12 | Ec53638_A0025 | 12520..12774 [+], 255 | 188574208 | replication protein | | |
| 13 | Ec53638_A0026 (repA1) | 13067..13936 [+], 870 | 188574214 | replication protein | | |
| |
| Region 2: 51620..73679 |
 |
| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | Ec53638_A0076 (psiB) | 47111..47545 [+], 435 | 188574180 | plasmid SOS inhibition protein B | | |
| 2 | Ec53638_A0077 (psiA) | 47542..48261 [+], 720 | 188574207 | plasmid SOS inhibition protein A | | |
| 3 | Ec53638_A0078 | 48261..48779 [+], 519 | 188574192 | hypothetical protein | | |
| 4 | Ec53638_A0079 (hok) | 48955..49116 [+], 162 | 188574217 | stable plasmid inheritance protein Hok | | |
| 5 | Ec53638_A0080 | 49209..49373 [+], 165 | 188574244 | hypothetical protein | | |
| 6 | Ec53638_A0083 | 50097..50384 [+], 288 | 188574204 | hypothetical protein | | |
| 7 | Ec53638_A0084 | 50419..51324 [+], 906 | 188574224 | hypothetical protein | | |
| 8 | Ec53638_A0085 | 51460..51594 [+], 135 | 188574187 | putative ORF | | |
| 9 | Ec53638_A0086 | 51620..52210 [-], 591 | 188574239 | lytic transglycosylase | Orf169_F | |
| 10 | Ec53638_A0087 (traM) | 52506..52928 [+], 423 | 188574264 | conjugal transfer protein TraM | TraM_F | |
| 11 | Ec53638_A0088 | 53122..53793 [+], 672 | 188574230 | conjugal transfer transcriptional regulator TraJ | | |
| 12 | Ec53638_A0089 | 53930..54157 [+], 228 | 188574233 | conjugal transfer protein TraY | TraY_F | |
| 13 | Ec53638_A0090 (traA) | 54190..54555 [+], 366 | 188574237 | conjugal transfer pilin subunit TraA | TraA_F | |
| 14 | Ec53638_A0091 (traL) | 54570..54881 [+], 312 | 188574248 | conjugal transfer pilus assembly protein TraL | TraL_F | |
| 15 | Ec53638_A0092 (traE) | 54903..55469 [+], 567 | 188574232 | conjugal transfer pilus assembly protein TraE | TraE_F | |
| 16 | Ec53638_A0093 (traK) | 55456..56184 [+], 729 | 188574259 | conjugal transfer protein TraK | TraK_F | |
| 17 | Ec53638_A0094 (traB) | 56184..57611 [+], 1428 | 188574253 | conjugal transfer pilus assembly protein TraB | TraB_F | |
| 18 | Ec53638_A0095 (traP) | 57601..58191 [+], 591 | 188574216 | conjugal transfer protein TraP | | |
| 19 | Ec53638_A0096 | 58178..58402 [+], 225 | 188574196 | conjugal transfer protein TrbD | | |
| 20 | Ec53638_A0097 (traV) | 58399..58914 [+], 516 | 188574249 | conjugal transfer protein TraV | TraV_F | |
| 21 | Ec53638_A0098 | 59049..59309 [+], 261 | 188574265 | conjugal transfer protein TraR | | |
| 22 | Ec53638_A0099 (traC) | 59435..62065 [+], 2631 | 188574188 | conjugal transfer ATP-binding protein TraC | TraC_F | |
| 23 | Ec53638_A0100 (trbI) | 62143..62448 [+], 306 | 188574234 | conjugal transfer protein TrbI | | |
| 24 | Ec53638_A0101 (traW) | 62445..63077 [+], 633 | 188574220 | conjugal transfer pilus assembly protein TraW | TraW_F | |
| 25 | Ec53638_A0102 (traU) | 63074..64066 [+], 993 | 188574177 | conjugal transfer pilus assembly protein TraU | TraU_F | |
| 26 | Ec53638_A0103 | 64096..64401 [+], 306 | 188574212 | hypothetical protein | | |
| 27 | Ec53638_A0104 (trbC) | 64398..65048 [+], 651 | 188574242 | conjugal transfer pilus assembly protein TrbC | TrbC_F | |
| 28 | Ec53638_A0105 (traN) | 65045..66853 [+], 1809 | 188574189 | conjugal transfer mating pair stabilization protein TraN | TraN_F | |
| 29 | Ec53638_A0106 (trbE) | 66880..67137 [+], 258 | 188574269 | conjugal transfer protein TrbE | | |
| 30 | Ec53638_A0107 (traF) | 67130..67873 [+], 744 | 188574191 | conjugal pilus assembly protein TraF | TraF_F | |
| 31 | Ec53638_A0108 (trbA) | 67889..68236 [+], 348 | 188574246 | conjugal transfer protein TrbA | | |
| 32 | Ec53638_A0109 (traQ) | 68355..68639 [+], 285 | 188574247 | conjugal transfer pilin chaperone TraQ | TraQ_F | |
| 33 | Ec53638_A0110 (trbB) | 68626..69171 [+], 546 | 188574228 | conjugal transfer protein TrbB | | |
| 34 | Ec53638_A0111 (trbJ) | 69161..69463 [+], 303 | 188574225 | conjugal transfer protein TrbJ | | |
| 35 | Ec53638_A0112 | 69460..70836 [+], 1377 | 188574243 | conjugal transfer pilus assembly protein TraH | TraH_F | |
| 36 | Ec53638_A0010 | 70833..73679 [+], 2847 | 188574227 | conjugal transfer mating pair stabilization protein TraG | TraG_F | |
| 37 | Ec53638_A0011 | 73676..74185 [+], 510 | 188574229 | conjugal transfer entry exclusion protein TraS | | |
| 38 | Ec53638_A0012 | 74199..74984 [+], 786 | 188574215 | hypothetical protein | | |
| |
T4SS ID
This T4SS is identified in this study.
Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.