SecReT4

T4SS
References

T4SS ID	741
Strain	Cupriavidus necator N-1
Replicon	chromosome 1 [Browse all T4SS(s) in this replicon]
Accession	NC_015726
Location	2872138..2892595
Name	Tfc
Function	NA
Classification	Type IVC; Type G
This T4SS is identified in this study.

T4SS components

Component	Tfc1	Tfc2	Tfc3	Tfc4	Tfc5	Tfc6	Tfc7	Tfc8	Tfc9
Number	0	1	1	1	1	1	0	1	1
Component	Tfc10	Tfc11	Tfc12	Tfc13	Tfc14	Tfc15	Tfc16	Tfc17	Tfc18
Number	0	1	1	1	1	1	1	0	0
Component	Tfc19	Tfc20	Tfc21	Tfc22	Tfc23	Tfc24
Number	1	0	0	1	1	0

The information of T4SS components from NC_015726

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	CNE_1c27660	2868096..2868446 [-], 351	339326868	hypothetical protein
2	CNE_1c27670	2869564..2871408 [-], 1845	339326869	hypothetical protein
3	CNE_1c27680	2872138..2873655 [-], 1518	339326870	hypothetical protein	Tfc19
4	CNE_1c27690	2873671..2874024 [-], 354	339326871	hypothetical protein
5	CNE_1c27700	2874021..2875424 [-], 1404	339326872	hypothetical protein	Tfc22
6	CNE_1c27710	2875434..2876384 [-], 951	339326873	hypothetical protein	Tfc23
7	CNE_1c27720	2876381..2876821 [-], 441	339326874	hypothetical protein
8	CNE_1c27730 (radC1)	2877015..2877506 [-], 492	339326875	DNA repair protein RadC
9	CNE_1c27740	2877700..2878458 [-], 759	339326876	hypothetical protein
10	CNE_1c27750	2878469..2881354 [-], 2886	339326877	hypothetical protein	Tfc16
11	CNE_1c27760	2881354..2881788 [-], 435	339326878	hypothetical protein	Tfc15
12	CNE_1c27770	2881769..2883235 [-], 1467	339326879	hypothetical protein	Tfc14
13	CNE_1c27780	2883225..2884145 [-], 921	339326880	hypothetical protein	Tfc13
14	CNE_1c27790	2884142..2884831 [-], 690	339326881	hypothetical protein	Tfc12
15	CNE_1c27800	2884828..2885277 [-], 450	339326882	hypothetical protein	Tfc11
16	CNE_1c27810	2885290..2885655 [-], 366	339326883	hypothetical protein
17	CNE_1c27820	2885679..2885918 [-], 240	339326884	hypothetical protein
18	CNE_1c27830	2885915..2886277 [-], 363	339326885	hypothetical protein	Tfc9
19	CNE_1c27840	2886307..2886450 [-], 144	339326886	hypothetical protein
20	CNE_1c27850	2886595..2887344 [-], 750	339326887	hypothetical protein	Tfc8
21	CNE_1c27860	2887341..2889512 [-], 2172	339326888	hypothetical protein	Tfc6
22	CNE_1c27870	2889528..2890064 [-], 537	339326889	hypothetical protein	Tfc5
23	CNE_1c27880	2890072..2890647 [-], 576	339326890	lytic transglycosylase	Tfc4
24	CNE_1c27890	2890632..2891357 [-], 726	339326891	hypothetical protein	Tfc3
25	CNE_1c27900	2891367..2892020 [-], 654	339326892	hypothetical protein
26	CNE_1c27910	2892017..2892595 [-], 579	339326893	hypothetical protein	Tfc2
27	CNE_1c27920	2893661..2893792 [-], 132	339326894	hypothetical protein
28	CNE_1c27930	2894043..2894162 [-], 120	339326895	hypothetical protein
29	CNE_1c27940	2894223..2894771 [-], 549	339326896	hypothetical protein
30	CNE_1c27950	2894768..2895544 [-], 777	339326897	hypothetical protein
31	CNE_1c27960	2895911..2897113 [-], 1203	339326898	DNA (cytosine-5-)-methyltransferase
32	CNE_1c27970	2897146..2897292 [+], 147	339326899	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_015726