SecReT4

T4SS
References

T4SS ID	586
Strain	Salmonella enterica subsp. enterica serovar Newport str. SL254
Replicon	plasmid pSN254 [Browse all T4SS(s) in this replicon]
Accession	NC_009140
Location	46409..58864; 81520..90637; 165346..173357
Name	Tra_F
Function	conjugation
Classification	Type IVA; Type F
Experimental investigation has been performed on this T4SS.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	1	1	1	1	1	1	1	1	1
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	1	1	0	1	0	1	1	1	0
Component	TraY_F	TrbC_F	Orf169_F
Number	0	0	1

The information of T4SS components from NC_009140
Region 1: 46409..58864

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	SNSL254_pSN254_0060	41495..42112 [+], 618	134047238	hypothetical protein
2	SNSL254_pSN254_0061	42345..42623 [+], 279	134047270	hypothetical protein
3	SNSL254_pSN254_0062	42714..43202 [-], 489	134047174	hypothetical protein
4	SNSL254_pSN254_0063 (topB)	43217..45409 [-], 2193	134047127	DNA topoisomerase III
5	SNSL254_pSN254_0064	45624..46241 [-], 618	134047182	lipoprotein
6	SNSL254_pSN254_0065 (traI)	46409..49381 [+], 2973	134047158	type IV conjugative transfer system protein TraI	TraI_F
7	SNSL254_pSN254_0066 (traD)	49378..51243 [+], 1866	134047236	type IV conjugative transfer system protein TraD	TraD_F
8	SNSL254_pSN254_0067	51254..51838 [+], 585	134047096	hypothetical protein
9	SNSL254_pSN254_0068	51795..52424 [+], 630	134047224	type IV conjugative transfer system coupling factor
10	SNSL254_pSN254_0069	52434..52880 [+], 447	134047258	hypothetical protein
11	SNSL254_pSN254_0070	52890..53267 [+], 378	134047170	hypothetical protein
12	SNSL254_pSN254_0071	53339..53929 [+], 591	134047099	hypothetical protein
13	SNSL254_pSN254_0072	54265..54630 [+], 366	134047242	hypothetical protein
14	SNSL254_pSN254_0073 (traL)	54775..55056 [+], 282	134047157	type IV conjugative transfer system protein TraL	TraL_F
15	SNSL254_pSN254_0074 (traE)	55053..55679 [+], 627	134047205	type IV conjugative transfer system protein TraE	TraE_F
16	SNSL254_pSN254_0075	55663..56580 [+], 918	134047107	hypothetical protein	TraK_F
17	SNSL254_pSN254_0076 (traB)	56577..57893 [+], 1317	134047150	type IV conjugative transfer system protein TraB	TraB_F
18	SNSL254_pSN254_0077 (traV)	57890..58468 [+], 579	134047241	type IV conjugative transfer system protein TraV	TraV_F
19	SNSL254_pSN254_0078 (traA)	58481..58864 [+], 384	134047118	type IV conjugative transfer system protein TraA	TraA_F
20	SNSL254_pSN254_0081	60806..61513 [-], 708	134047123	hypothetical protein

Region 2: 81520..90637

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	SNSL254_pSN254_0094	80816..81523 [+], 708	134047146	hypothetical protein
2	SNSL254_pSN254_0095 (traC)	81520..83967 [+], 2448	134047203	type IV conjugative transfer system protein TraC	TraC_F
3	SNSL254_pSN254_0096	83982..84299 [+], 318	134047176	hypothetical protein
4	SNSL254_pSN254_0097	84296..84826 [+], 531	134047165	type IV conjugative transfer system signal peptidase
5	SNSL254_pSN254_0098 (traW)	84789..86054 [+], 1266	134047266	type IV conjugative transfer system protein TraW	TraW_F
6	SNSL254_pSN254_0099	86051..86722 [+], 672	134047159	cyclic diguanylate phosphodiesterase domain-containing protein
7	SNSL254_pSN254_0100 (traU)	86719..87726 [+], 1008	134047249	type IV conjugative transfer system protein TraU	TraU_F
8	SNSL254_pSN254_0101 (traN)	87842..90637 [+], 2796	134047133	conjugal transfer mating pair stabilization protein TraN	TraN_F
9	SNSL254_pSN254_0102	90676..91536 [-], 861	134047164	lipoprotein
10	SNSL254_pSN254_0103	91659..92300 [-], 642	134047093	hypothetical protein
11	SNSL254_pSN254_0104	92595..92915 [+], 321	134047273	hypothetical protein
12	SNSL254_pSN254_0105	93219..93404 [+], 186	134047084	hypothetical protein
13	SNSL254_pSN254_0106	93624..94592 [+], 969	134047151	AAA family ATPase
14	SNSL254_pSN254_0107	94603..95511 [+], 909	134047175	hypothetical protein

Region 3: 165346..173357

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	SNSL254_pSN254_0182	160530..161021 [+], 492	134047233	hypothetical protein
2	SNSL254_pSN254_0183	161348..162223 [+], 876	134047095	DNA replication terminus site-binding protein
3	SNSL254_pSN254_0184	162385..163425 [+], 1041	134047219	hypothetical protein
4	SNSL254_pSN254_0185	163425..163703 [+], 279	134047187	hypothetical protein
5	SNSL254_pSN254_0186	163712..165223 [+], 1512	134047111	hypothetical protein
6	SNSL254_pSN254_0187 (traF)	165346..166374 [+], 1029	134047253	type IV conjugative transfer system protein TraF	TraF_F
7	SNSL254_pSN254_0188 (traH)	166376..167809 [+], 1434	134047117	type IV conjugative transfer system protein TraH	TraH_F
8	SNSL254_pSN254_0189 (traG)	167822..171436 [+], 3615	134047246	type IV conjugative transfer system protein TraG	TraG_F
9	SNSL254_pSN254_0190	171474..171836 [-], 363	134047240	hypothetical protein
10	SNSL254_pSN254_0191	172552..172824 [+], 273	134047185	hypothetical protein
11	SNSL254_pSN254_0192	172824..173357 [+], 534	134047211	transglycosylase	Orf169_F
12	SNSL254_pSN254_0193	173368..173976 [+], 609	134047245	hypothetical protein
13	SNSL254_pSN254_0194	173973..174257 [+], 285	134047181	hypothetical protein
14	SNSL254_pSN254_0196	174583..175002 [-], 420	134047120	hypothetical protein
15	SNSL254_pSN254_0197	175004..175297 [-], 294	134047222	hypothetical protein
16	SNSL254_pSN254_0198	175314..176297 [-], 984	134047108	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Welch TJ; Fricke WF; McDermott PF; White DG; Rosso ML; Rasko DA; Mammel MK; Eppinger M; Rosovitz MJ; Wagner D; Rahalison L; Leclerc JE; Hinshaw JM; Lindler LE; Cebula TA; Carniel E; Ravel J (2007). Multiple antimicrobial resistance in plague: an emerging public health risk. PLoS One. 2(3):e309. [PudMed:17375195]