SecReT4

T4SS
References

T4SS ID	550
Strain	Alicycliphilus denitrificans K601
Replicon	plasmid pALIDE201 [Browse all T4SS(s) in this replicon]
Accession	NC_015423
Location	396..29360
Name	Tra_F
Function	NA
Classification	Type IVA; Type F
This T4SS is identified in this study.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	0	1	1	1	1	1	1	1	1
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	1	1	0	1	0	1	1	1	0
Component	TraY_F	TrbC_F	Orf169_F
Number	0	1	1

The information of T4SS components from NC_015423

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Alide2_4750	17..394 [+], 378	330827326	hypothetical protein
2	Alide2_4751	396..2393 [+], 1998	330827327	type IV secretion system protein TraD	TraD_F
3	Alide2_4752	2405..2860 [+], 456	330827328	putative thiol:disulfide interchange transmembrane protein
4	Alide2_4753	2857..5742 [+], 2886	330827329	conjugative relaxase domain-containing protein	TraI_F
5	Alide2_4754	5884..6096 [+], 213	330827330	hypothetical protein
6	Alide2_4755	6187..7041 [+], 855	330827331	YheO-like domain-containing protein
7	Alide2_4756	7074..7349 [+], 276	330827332	hypothetical protein
8	Alide2_4757	7358..8326 [+], 969	330827333	integral membrane sensor signal transduction histidine kinase
9	Alide2_4758	8295..8954 [-], 660	330827334	two component LuxR family transcriptional regulator
10	Alide2_4759	9438..9938 [+], 501	330827335	lytic transglycosylase catalytic subunit	Orf169_F
11	Alide2_4760	9940..10323 [+], 384	330827336	hypothetical protein
12	Alide2_4761	10418..10750 [+], 333	330827337	Conjugal transfer protein TrbC
13	Alide2_4762	10766..11059 [+], 294	330827338	type IV conjugative transfer system protein TraL	TraL_F
14	Alide2_4763	11074..11667 [+], 594	330827339	hypothetical protein	TraE_F
15	Alide2_4764	11777..12340 [+], 564	330827340	hypothetical protein	TraK_F
16	Alide2_4765	12333..13682 [+], 1350	330827341	conjugation TrbI family protein	TraB_F
17	Alide2_4766	13675..14424 [+], 750	330827342	disulfide bond isomerase, DsbC/G
18	Alide2_4767	14421..14570 [+], 150	330827343	hypothetical protein
19	Alide2_4768	14567..15217 [+], 651	330827344	type IV conjugative transfer system protein TraV	TraV_F
20	Alide2_4769	15255..17879 [+], 2625	330827345	type-IV secretion system protein TraC	TraC_F
21	Alide2_4770	17869..18297 [+], 429	330827346	hypothetical protein
22	Alide2_4771	18297..18773 [+], 477	330827347	peptidase S26
23	Alide2_4772	18760..19398 [+], 639	330827348	type-F conjugative transfer system protein TraW	TraW_F
24	Alide2_4773	19395..20396 [+], 1002	330827349	TraU family protein	TraU_F
25	Alide2_4774	20396..21172 [+], 777	330827350	type-F conjugative transfer system pilin assembly protein TrbC	TrbC_F
26	Alide2_4775	21169..22467 [+], 1299	330827351	hypothetical protein
27	Alide2_4776	22464..23708 [+], 1245	330827352	Mating pair stabilization TraN	TraN_F
28	Alide2_4777	23705..24067 [+], 363	330827353	hypothetical protein
29	Alide2_4778	24072..24884 [+], 813	330827354	hypothetical protein	TraF_F
30	Alide2_4779	24895..26301 [+], 1407	330827355	TraH family protein	TraH_F
31	Alide2_4780	26313..29360 [+], 3048	330827356	TraG domain-containing protein	TraG_F
32	Alide2_4781	29696..29950 [-], 255	330827357	hypothetical protein
33	Alide2_4782	30439..31164 [+], 726	330827358	peptidase M48 Ste24p
34	Alide2_4783	31172..31432 [+], 261	330827359	hypothetical protein
35	Alide2_4784	31432..31851 [+], 420	330827360	hypothetical protein
36	Alide2_4785	31848..32372 [+], 525	330827361	hypothetical protein
37	Alide2_4786	32396..32764 [+], 369	330827362	hypothetical protein
38	Alide2_4787	32890..33135 [+], 246	330827363	hypothetical protein
39	Alide2_4788	33148..33375 [+], 228	330827364	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_015423