SecReT4

T4SS
References

T4SS ID	535
Strain	Shewanella baltica OS223
Replicon	plasmid pS22301 [Browse all T4SS(s) in this replicon]
Accession	NC_011664
Location	39422..65618
Name	Tra_F
Function	NA
Classification	Type IVA; Type F
This T4SS is identified in this study.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	1	1	1	1	1	1	1	1	1
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	1	1	0	1	0	1	1	1	0
Component	TraY_F	TrbC_F	Orf169_F
Number	1	1	0

The information of T4SS components from NC_011664

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Sbal223_4366	35327..36526 [-], 1200	217975579	Cobyrinic acid ac-diamide synthase
2	Sbal223_4367	36695..36922 [+], 228	217975580	hypothetical protein
3	Sbal223_4368	37583..38314 [-], 732	217975581	hypothetical protein
4	Sbal223_4369	38761..38862 [-], 102	217975582	hypothetical protein
5	Sbal223_4370	39063..39320 [+], 258	217975583	hypothetical protein
6	Sbal223_4371	39422..39610 [+], 189	217975584	hypothetical protein	TraY_F
7	Sbal223_4372	39674..40048 [+], 375	217975585	hypothetical protein	TraA_F
8	Sbal223_4373	40052..40354 [+], 303	217975586	type IV conjugative transfer system protein TraL	TraL_F
9	Sbal223_4374	40395..40961 [+], 567	217975587	type IV conjugative transfer system protein TraE	TraE_F
10	Sbal223_4375	40961..41779 [+], 819	217975588	type-F conjugative transfer system secretin TraK	TraK_F
11	Sbal223_4376	41776..43302 [+], 1527	217975589	TraB pilus assembly family protein	TraB_F
12	Sbal223_4377	43323..43778 [+], 456	217975590	type IV conjugative transfer system protein TraV	TraV_F
13	Sbal223_4378	43782..46370 [+], 2589	217975591	type-IV secretion system protein TraC	TraC_F
14	Sbal223_4379	46372..46743 [+], 372	217975592	conjugal transfer protein TrbI
15	Sbal223_4380	46740..47444 [+], 705	217975593	type-F conjugative transfer system protein TraW	TraW_F
16	Sbal223_4381	47431..48444 [+], 1014	217975594	TraU family protein	TraU_F
17	Sbal223_4382	48467..49207 [+], 741	217975595	type-F conjugative transfer system pilin assembly protein TrbC	TrbC_F
18	Sbal223_4383	49204..51006 [+], 1803	217975596	conjugal transfer mating pair stabilization protein TraN	TraN_F
19	Sbal223_4384	51003..51878 [+], 876	217975597	type-F conjugative transfer system pilin assembly protein TraF	TraF_F
20	Sbal223_4385	51892..52329 [+], 438	217975598	type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB
21	Sbal223_4386	52341..52505 [+], 165	217975599	hypothetical protein
22	Sbal223_4387	52502..53890 [+], 1389	217975600	TraH family protein	TraH_F
23	Sbal223_4388	53893..56706 [+], 2814	217975601	TraG domain protein	TraG_F
24	Sbal223_4389	56744..57277 [+], 534	217975602	hypothetical protein
25	Sbal223_4390	57280..59406 [+], 2127	217975603	type IV conjugative transfer system coupling protein TraD	TraD_F
26	Sbal223_4391	59420..59599 [+], 180	217975604	hypothetical protein
27	Sbal223_4392	59658..65618 [+], 5961	217975605	conjugative transfer relaxase protein TraI	TraI_F
28	Sbal223_4393	65639..65998 [-], 360	217975606	hypothetical protein
29	Sbal223_4394	67489..68313 [-], 825	217975607	hypothetical protein
30	Sbal223_4396	69045..70154 [-], 1110	217975608	transposase IS4 family protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_011664