SecReT4

T4SS
References

T4SS ID	528
Strain	Novosphingobium aromaticivorans DSM 12444
Replicon	plasmid pNL1 [Browse all T4SS(s) in this replicon]
Accession	NC_009426
Location	147458..182408
Name	Tra_F
Function	NA
Classification	Type IVA; Type F
This T4SS is identified in this study.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	0	1	1	1	1	1	0	1	1
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	1	1	0	1	0	1	1	1	0
Component	TraY_F	TrbC_F	Orf169_F
Number	0	1	1

The information of T4SS components from NC_009426

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Saro_3976	143702..144445 [-], 744	146275583	hypothetical protein
2	Saro_3977	144582..145625 [+], 1044	146275584	hypothetical protein
3	Saro_3978	145679..146062 [+], 384	146275585	hypothetical protein
4	Saro_3979	146059..146370 [+], 312	146275586	hypothetical protein
5	Saro_3980	146430..146876 [+], 447	146275587	hypothetical protein
6	Saro_3981	147181..147471 [+], 291	146275588	CopG/DNA-binding domain-containing protein
7	Saro_3982	147458..149788 [+], 2331	146275589	Type IV secretory pathway VirD4 components-like protein	TraD_F
8	Saro_3983	149792..152833 [+], 3042	146275590	hypothetical protein	TraI_F
9	Saro_3984	152830..153072 [+], 243	146275591	hypothetical protein
10	Saro_3985	153075..153278 [+], 204	146275592	hypothetical protein
11	Saro_3986	153295..153654 [+], 360	146275593	hypothetical protein
12	Saro_3987	153763..156204 [+], 2442	146275594	type III restriction enzyme, res subunit
13	Saro_3988	156310..156525 [+], 216	146275595	hypothetical protein
14	Saro_3989	156765..156956 [+], 192	146275596	hypothetical protein
15	Saro_3990	156959..157759 [-], 801	146275597	GntR family transcriptional regulator
16	Saro_3991	157917..158579 [+], 663	146275598	hypothetical protein
17	Saro_3992	158684..158905 [+], 222	146275599	hypothetical protein
18	Saro_3994	159346..160292 [+], 947	146275600	transposase
19	Saro_3995	163015..164469 [-], 1455	146275601	TraH family protein	TraH_F
20	Saro_3996	164469..165281 [-], 813	146275602	hypothetical protein	TraF_F
21	Saro_3997	165278..165688 [-], 411	146275603	hypothetical protein
22	Saro_3998	165669..167783 [-], 2115	146275604	mating pair stabilisation TraN	TraN_F
23	Saro_3999	167785..168549 [-], 765	146275605	hypothetical protein	TrbC_F
24	Saro_4000	168558..169580 [-], 1023	146275606	TraU family protein	TraU_F
25	Saro_4001	169577..169843 [-], 267	146275607	hypothetical protein
26	Saro_4002	169840..170535 [-], 696	146275608	hypothetical protein	TraW_F
27	Saro_4003	170532..171074 [-], 543	146275609	hypothetical protein
28	Saro_4004	171058..171639 [-], 582	146275610	hypothetical protein
29	Saro_4005	171629..171991 [-], 363	146275611	hypothetical protein
30	Saro_4006	171988..174594 [-], 2607	146275612	type IV secretion/conjugal transfer ATPase	TraC_F
31	Saro_4007	174601..175752 [-], 1152	146275613	hypothetical protein	TraV_F
32	Saro_4008	175749..176645 [-], 897	146275614	hypothetical protein
33	Saro_4009	176656..178032 [-], 1377	146275615	TraB pilus assembly family protein	TraB_F
34	Saro_4010	178032..178826 [-], 795	146275616	hypothetical protein	TraK_F
35	Saro_4011	178826..179449 [-], 624	146275617	TraE family protein	TraE_F
36	Saro_4012	179463..179756 [-], 294	146275618	TraL family protein	TraL_F
37	Saro_4013	179813..180127 [-], 315	146275619	hypothetical protein
38	Saro_4014	180267..181436 [+], 1170	146275620	hypothetical protein
39	Saro_4015	181447..181722 [+], 276	146275621	hypothetical protein
40	Saro_4016	181689..182408 [-], 720	146275622	lytic transglycosylase, catalytic	Orf169_F
41	Saro_4017	182667..183335 [-], 669	146275623	dimethylmenaquinone methyltransferase
42	Saro_4018	183328..184026 [-], 699	146275624	dimethylmenaquinone methyltransferase
43	Saro_4019	184019..184411 [-], 393	146275625	endoribonuclease L-PSP

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_009426