SecReT4

T4SS
References

T4SS ID	519
Strain	Vibrio vulnificus CMCP6
Replicon	chromosome II [Browse all T4SS(s) in this replicon]
Accession	NC_004460
Location	682882..721744
Name	Tra_F
Function	NA
Classification	Type IVA; Type F
This T4SS is identified in this study.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	1	1	2	1	1	1	1	1	1
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	1	1	0	1	0	1	0	1	0
Component	TraY_F	TrbC_F	Orf169_F
Number	0	1	0

The information of T4SS components from NC_004460

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	VV2_0625	678043..678447 [-], 405	27367052	hypothetical protein
2	VV2_0626	678464..679624 [-], 1161	27367053	methyl-accepting chemotaxis protein
3	VV2_0627	679665..680657 [-], 993	27367054	hypothetical protein
4	VV2_0629	681131..681373 [-], 243	27367055	GMP reductase
5	VV2_0630	682420..682797 [+], 378	27367056	hypothetical protein
6	VV2_0631 (traA)	682882..683178 [+], 297	27367057	type IV conjugative transfer system pilin TraA	TraA_F
7	VV2_0632 (traL)	683196..683498 [+], 303	27367058	type IV conjugative transfer system protein TraL	TraL_F
8	VV2_0633 (traE)	683512..684081 [+], 570	27367059	type IV conjugative transfer system protein TraE	TraE_F
9	VV2_0634 (traK)	684078..684821 [+], 744	27367060	type-F conjugative transfer system secretin TraK	TraK_F
10	VV2_0635	684811..686292 [+], 1482	27367061	IncF plasmid conjugative transfer pilus assembly protein TraB	TraB_F
11	VV2_0636 (traV)	686323..686691 [+], 369	27367062	type IV conjugative transfer system protein TraV	TraV
12	VV2_0637	686694..687875 [+], 1182	27367063	hypothetical protein	TraC_F
13	VV2_0638	687830..688993 [+], 1164	326424266	Type IV secretory pathway, VirB4 component	TraC_F
14	VV2_0639 (trbI)	688990..689334 [+], 345	27367065	type-F conjugative transfer system protein TrbI
15	VV2_0640 (traW)	689331..690011 [+], 681	27367066	type-F conjugative transfer system protein TraW	TraW_F
16	VV2_0641	690008..691015 [+], 1008	326424267	IncF plasmid conjugative transfer pilus assembly protein TraU	TraU_F
17	VV2_0642	691420..691602 [+], 183	27367068	hypothetical protein
18	VV2_0643	691655..691894 [+], 240	27367069	hypothetical protein
19	VV2_0644 (trbC)	691904..692611 [+], 708	326424268	type-F conjugative transfer system pilin assembly protein TrbC	TrbC_F
20	VV2_0645 (traN)	692608..694353 [+], 1746	27367071	conjugal transfer protein TraN	TraN_F
21	VV2_0646 (traF)	694343..695167 [+], 825	27367072	type-F conjugative transfer system pilin assembly protein TraF	TraF_F
22	VV2_0647 (trbB)	695189..695602 [+], 414	27367073	type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB
23	VV2_0648	695838..697247 [+], 1410	326424269	IncF plasmid conjugative transfer pilus assembly protein TraH	TraH_F
24	VV2_0649	697251..700058 [+], 2808	27367075	IncF plasmid conjugative transfer protein TraG	TraG_F
25	VV2_0650	700909..701781 [-], 873	27367076	phage-like protein
26	VV2_0651	701992..703179 [-], 1188	27367077	major facilitator superfamily permease
27	VV2_0652	703180..703917 [-], 738	326424270	GTPase
28	VV2_0654	704462..704647 [+], 186	27367079	transposase
29	VV2_0655	704975..705469 [+], 495	27367080	integrase
30	VV2_0656	705826..706536 [-], 711	27367081	hypothetical protein
31	VV2_0657	706549..707814 [-], 1266	27367082	hypothetical protein
32	VV2_0658	708404..712216 [+], 3813	27367083	hypothetical protein
33	VV2_0659 (traD)	712452..714545 [+], 2094	27367084	type IV conjugative transfer system coupling protein TraD	TraD_F
34	VV2_0660	714784..715062 [+], 279	27367085	hypothetical protein
35	VV2_0661	715153..715503 [+], 351	27367086	endonuclease I
36	VV2_0662	715657..715854 [+], 198	27367087	hypothetical protein
37	VV2_0663 (traI)	715958..721744 [+], 5787	27367088	conjugative transfer relaxase TraI	TraI_F
38	VV2_0664	721763..722134 [-], 372	27367089	hypothetical protein
39	VV2_1692	722453..722815 [+], 363	326424271	hypothetical protein
40	VV2_0665	723602..723967 [-], 366	27367090	hypothetical protein
41	VV2_0666	723971..724351 [-], 381	27367091	hypothetical protein
42	VV2_0667	725307..725546 [+], 240	27367092	integrase

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_004460