SecReT4

T4SS
References

T4SS ID	516
Strain	Burkholderia cenocepacia HI2424
Replicon	plasmid 1 [Browse all T4SS(s) in this replicon]
Accession	NC_008545
Location	1389..27585; 157460..162469
Name	Tra_F
Function	NA
Classification	Type IVA; Type F
This T4SS is identified in this study.

T4SS components

Component	TraA_F	TraB_F	TraC_F	TraD_F	TraE_F	TraF_F	TraG_F	TraH_F	TraI_F
Number	0	1	1	1	1	1	1	1	1
Component	TraK_F	TraL_F	TraM_F	TraN_F	TraQ_F	TraU_F	TraV_F	TraW_F	TraX_F
Number	1	0	0	1	0	1	1	1	0
Component	TraY_F	TrbC_F	Orf169_F
Number	0	1	1

The information of T4SS components from NC_008545
Region 1: 1389..27585

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Bcen2424_6789	1389..1886 [+], 498	116687165	lytic transglycosylase, catalytic	Orf169_F
2	Bcen2424_6790	1883..2272 [+], 390	116687166	hypothetical protein
3	Bcen2424_6791	2452..2850 [+], 399	116687167	hypothetical protein
4	Bcen2424_6792	3155..3766 [+], 612	116687168	hypothetical protein	TraE_F
5	Bcen2424_6793	4030..4509 [+], 480	116687169	hypothetical protein	TraK_F
6	Bcen2424_6794	4502..5824 [+], 1323	116687170	TraB pilus assembly family protein	TraB_F
7	Bcen2424_6795	5817..6638 [+], 822	116687171	hypothetical protein
8	Bcen2424_6796	6635..7063 [+], 429	116687172	hypothetical protein
9	Bcen2424_6797	7060..7518 [+], 459	116687173	hypothetical protein
10	Bcen2424_6798	7853..8146 [+], 294	116687174	hypothetical protein
11	Bcen2424_6799	8224..9054 [+], 831	116687175	protein-disulfide isomerase
12	Bcen2424_6800	9057..9737 [+], 681	116687176	hypothetical protein	TraV_F
13	Bcen2424_6801	9752..12346 [+], 2595	116687177	hypothetical protein	TraC_F
14	Bcen2424_6802	12343..12717 [+], 375	116687178	hypothetical protein
15	Bcen2424_6803	12932..13441 [+], 510	116687179	Type IV secretory pathway protease TraF-like protein
16	Bcen2424_6804	13734..14375 [+], 642	116687180	hypothetical protein	TraW_F
17	Bcen2424_6805	14422..15114 [+], 693	116687181	hypothetical protein
18	Bcen2424_6806	15111..16142 [+], 1032	116687182	TraU family protein	TraU_F
19	Bcen2424_6807	16139..16927 [+], 789	116687183	hypothetical protein	TrbC_F
20	Bcen2424_6808	16924..18213 [+], 1290	116687184	hypothetical protein
21	Bcen2424_6809	18210..19490 [+], 1281	116687185	conjugal transfer mating pair stabilization protein TraN	TraN_F
22	Bcen2424_6810	19487..19879 [+], 393	116687186	hypothetical protein
23	Bcen2424_6811	20310..20567 [-], 258	116687187	hypothetical protein
24	Bcen2424_6812	20572..21396 [+], 825	116687188	hypothetical protein
25	Bcen2424_6813	21393..22202 [+], 810	116687189	hypothetical protein	TraF_F
26	Bcen2424_6814	22202..23647 [+], 1446	116687190	TraH family protein	TraH_F
27	Bcen2424_6815	23644..27585 [+], 3942	116687191	TraG domain-containing protein	TraG_F
28	Bcen2424_6816	27623..28015 [-], 393	116687192	hypothetical protein
29	Bcen2424_6817	28279..28905 [+], 627	116687193	putative endonuclease
30	Bcen2424_6818	28939..29199 [+], 261	116687194	hypothetical protein
31	Bcen2424_6819	29214..31193 [+], 1980	116687195	zeta toxin family protein
32	Bcen2424_6820	31202..31618 [+], 417	116687196	hypothetical protein
33	Bcen2424_6821	31673..32071 [+], 399	116687197	lipoprotein

Region 2: 157460..162469

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Bcen2424_6936	152460..152855 [+], 396	116687309	hypothetical protein
2	Bcen2424_6937	152870..153136 [+], 267	116687310	hypothetical protein
3	Bcen2424_6938	153111..153662 [+], 552	116687311	hypothetical protein
4	Bcen2424_6939	153707..153928 [+], 222	116687312	hypothetical protein
5	Bcen2424_6940	154233..154526 [+], 294	116687313	hypothetical protein
6	Bcen2424_6941	154528..154827 [+], 300	116687314	putative transcriptional regulator
7	Bcen2424_6942	154992..155303 [-], 312	116687315	hypothetical protein
8	Bcen2424_6943	157066..157467 [+], 402	116687316	hypothetical protein
9	Bcen2424_6944	157460..159568 [+], 2109	116687317	Type IV secretory pathway VirD4 components-like protein	TraD_F
10	Bcen2424_6945	159575..162469 [+], 2895	116687318	TrwC protein	TraI_F
11	Bcen2424_6946	162883..163407 [+], 525	116687319	hypothetical protein
12	Bcen2424_6947	163770..164387 [+], 618	116687320	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_008545