T4SS ID	317
Strain	Mesorhizobium loti MAFF303099
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_002678
Location	5217849..5229642
Name	Trb
Function	conjugation
Classification	Type IVA; Type P
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	TrbB	TrbC	TrbD	TrbE	TrbF	TrbG	TrbH	TrbI	TrbJ
Number	1	1	0	1	1	1	0	1	1
Component	TrbK	TrbL	TrbN	TraF	TraG
Number	0	1	0	0	1

The information of T4SS components from NC_002678
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	mlr6390	5214702..5216027 [+], 1326	13475345	coproporphyrinogen III oxidase
2	mll6391	5216029..5216304 [-], 276	13475346	hypothetical protein
3	msl6392	5216337..5216495 [-], 159	13475347	hypothetical protein
4	mlr6394	5216933..5217364 [+], 432	13475348	hypothetical protein
5	mlr6395	5217849..5220056 [+], 2208	13475349	conjugal transfer protein TraG	TraG
6	msl8698	5220082..5220378 [-], 297	13475350	hypothetical protein
7	mlr6396	5220397..5220588 [+], 192	13475351	hypothetical protein
8	mlr6397	5220585..5221553 [+], 969	13475352	conjugal transfer protein traB	TrbB
9	mlr6398	5221565..5221873 [+], 309	13475353	conjugal transfer protein TRBC	TrbC
10	mlr6400	5222139..5224589 [+], 2451	13475354	conjugal transfer ATPase TrbE	TrbE
11	mlr6401	5224586..5225311 [+], 726	13475355	conjugal transfer protein TrbJ	TrbJ
12	mlr6402	5225343..5226665 [+], 1323	13475356	conjugal transfer protein TrbL	TrbL
13	mlr6403	5226666..5227391 [+], 726	13475357	conjugal transfer protein TrbF	TrbF
14	mlr6404	5227418..5228416 [+], 999	13475358	conjugal transfer protein trbG	TrbG
15	mlr6405	5228413..5229642 [+], 1230	13475359	conjugal transfer protein trbI	TrbI
16	msr6406	5229655..5229924 [+], 270	13475360	hypothetical protein
17	mll6408	5230462..5231811 [-], 1350	13475361	coproporphyrinogen III oxidase
18	mlr6409	5231969..5232724 [+], 756	13475362	transcriptional regulator
19	mll6410	5232728..5233267 [-], 540	13475363	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins        Genes

This T4SS is encoded by the integrative and conjugative element (ICE) ICEMloMAF-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)

(1) Kaneko T; Nakamura Y; Sato S; Asamizu E; Kato T; Sasamoto S; Watanabe A; Idesawa K; Ishikawa A; Kawashima K; Kimura T; Kishida Y; Kiyokawa C; Kohara M; Matsumoto M; Matsuno A; Mochizuki Y; Nakayama S; Nakazaki N; Shimpo S; Sugimoto M; Takeuchi C; Yamada M; Tabata S (2000). Complete genome structure of the nitrogen-fixing symbiotic bacterium Mesorhizobium loti. DNA Res. 7(6):331-8. [PudMed:11214968]