ICEberg
ICEberg contains data from 695 references related to integrative and conjugative elements (ICEs), integrative and mobilizable elements (IMEs), cis-mobilizable element (CIMEs). Last Update: May 02, 2018

Categories
reviews in silico analyses experimental studies genome sequencing all
Search
     
References
(1) Park J et al (2011). Characterization of the Bacteroides CTnDOT regulatory protein RteC. J Bacteriol. 193(1):91-7. [PubMed:21037014]
(2) Peed L et al (2010). Genetic and functional analyses of the mob operon on conjugative transposon CTn341 from Bacteroides spp. J Bacteriol. 192(18):4643-50. [PubMed:20639338]
(3) Wood MM et al (2010). CTnDOT integrase interactions with attachment site DNA and control of directionality of the recombination reaction. J Bacteriol. 192(15):3934-43. [PubMed:20511494]
(4) Laprise J et al (2010). Homology-dependent interactions determine the order of strand exchange by IntDOT recombinase. Nucleic Acids Res. 38(3):958-69. [PubMed:19952068]
(5) Jeters RT et al (2009). Tetracycline-associated transcriptional regulation of transfer genes of the Bacteroides conjugative transposon CTnDOT. J Bacteriol. 191(20):6374-82. [PubMed:19700528]
(6) Naito M et al (2008). Determination of the genome sequence of Porphyromonas gingivalis strain ATCC 33277 and genomic comparison with strain W83 revealed extensive genome rearrangements in P. gingivalis. DNA Res. 15(4):215-25. [PubMed:18524787]
(7) Malanowska K et al (2007). CTnDOT integrase performs ordered homology-dependent and homology-independent strand exchanges. Nucleic Acids Res. 35(17):5861-73. [PubMed:17720706]
(8) Moon K et al (2007). Unexpected effect of a Bacteroides conjugative transposon, CTnDOT, on chromosomal gene expression in its bacterial host. Mol Microbiol. 64(6):1562-71. [PubMed:17555438]
(9) Dichiara JM et al (2007). IntDOT interactions with core- and arm-type sites of the conjugative transposon CTnDOT. J Bacteriol. 189(7):2692-701. [PubMed:17277054]
(10) Malanowska K et al (2006). Characterization of a conjugative transposon integrase, IntDOT. Mol Microbiol. 60(5):1228-40. [PubMed:16689798]
(11) Whittle G et al (2006). A bacteroides conjugative transposon, CTnERL, can transfer a portion of itself by conjugation without excising from the chromosome. J Bacteriol. 188(3):1169-74. [PubMed:16428422]
(12) Moon K et al (2005). Regulation of excision genes of the Bacteroides conjugative transposon CTnDOT. J Bacteriol. 187(16):5732-41. [PubMed:16077120]
(13) DiChiara JM et al (2005). In vitro analysis of sequence requirements for the excision reaction of the Bacteroides conjugative transposon, CTnDOT. Mol Microbiol. 56(4):1035-48. [PubMed:15853888]
(14) Bacic M et al (2005). Genetic and structural analysis of the Bacteroides conjugative transposon CTn341. J Bacteriol. 187(8):2858-69. [PubMed:15805532]
(15) Wang Y et al (2005). Translational control of tetracycline resistance and conjugation in the Bacteroides conjugative transposon CTnDOT. J Bacteriol. 187(8):2673-80. [PubMed:15805513]
(16) Sutanto Y et al (2004). Factors required in vitro for excision of the Bacteroides conjugative transposon, CTnDOT. Plasmid. 52(2):119-30. [PubMed:15336489]
(17) Wang Y et al (2004). Regulation of a Bacteroides operon that controls excision and transfer of the conjugative transposon CTnDOT. J Bacteriol. 186(9):2548-57. [PubMed:15090494]
(18) Whittle G et al (2002). The role of Bacteroides conjugative transposons in the dissemination of antibiotic resistance genes. Cell Mol Life Sci. 59(12):2044-54. [PubMed:12568330]
(19) Sutanto Y et al (2002). Characterization of Exc, a novel protein required for the excision of Bacteroides conjugative transposon. Mol Microbiol. 46(5):1239-46. [PubMed:12453211]
(20) Cheng Q et al (2002). Development of an in vitro integration assay for the Bacteroides conjugative transposon CTnDOT. J Bacteriol. 184(17):4829-37. [PubMed:12169608]
(21) Whittle G et al (2002). Characterization of genes involved in modulation of conjugal transfer of the Bacteroides conjugative transposon CTnDOT. J Bacteriol. 184(14):3839-47. [PubMed:12081954]
(22) Bonheyo GT et al (2001). Transfer region of a Bacteroides conjugative transposon contains regulatory as well as structural genes. Plasmid. 46(3):202-9. [PubMed:11735369]
(23) Smith CJ et al (2001). Analysis of a Bacteroides conjugative transposon using a novel "targeted capture" model system. Plasmid. 46(1):47-56. [PubMed:11535035]
(24) Cheng Q et al (2001). Identification of genes required for excision of CTnDOT, a Bacteroides conjugative transposon. Mol Microbiol. 41(3):625-32. [PubMed:11532130]
(25) Whittle G et al (2001). Characterization of the 13-kilobase ermF region of the Bacteroides conjugative transposon CTnDOT. Appl Environ Microbiol. 67(8):3488-95. [PubMed:11472924]
(26) Cheng Q et al (2000). Integration and excision of a Bacteroides conjugative transposon, CTnDOT. J Bacteriol. 182(14):4035-43. [PubMed:10869083]
(27) Li LY et al (1995). Location and characteristics of the transfer region of a Bacteroides conjugative transposon and regulation of transfer genes. J Bacteriol. 177(17):4992-9. [PubMed:7665476]
(28) Bedzyk LA et al (1992). Insertion and excision of Bacteroides conjugative chromosomal elements. J Bacteriol. 174(1):166-72. [PubMed:1309516]
(29) Valentine PJ et al (1988). Mobilization of Bacteroides plasmids by Bacteroides conjugal elements. J Bacteriol. 170(3):1319-24. [PubMed:3343220]