ICEberg
I. Information of ICE
ICEberg ID322
Name ICESgal1 This is a predicted ICE derived from literature
OrganismStreptococcus gallolyticus UCN34
Size (bp)49483
GC content [Genome] (%)36.13
Insertion site-
FunctionTetracycline resistance
Species that ICE can be transferred to-
Nucleotide SequenceFN597254 (complete ICE sequence in this genome)
Replicon chromosome (2350911 bp, BioProject:46061) [NC_013798]
Genome coordinates1738037..1787519 
Putative oriT region -
Putative relaxase coordinates: 1782548..1783753; Locus tag: GALLO_1685;  Family:  MOBT


II. ICE interaction with IME/CIME/

The interaction information of ICESgal1 is not available.



The graph information of ICESgal1 components from FN597254
Complete gene list of ICESgal1 from FN597254
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)		 *Reannotation 
1rplA1733466..1734155 [-], 690ribosomal protein L1
2rplK1734310..1734735 [-], 426ribosomal protein L11
3GALLO_16441735091..1735438 [+], 348conserved hypothetical membrane protein
4GALLO_16451735471..1737882 [-], 2412putative DNA translocase, DnaK family
5GALLO_16461738037..1739167 [-], 1131putative integrase
6GALLO_16471739222..1739452 [-], 231putative excisionase
7GALLO_16481739766..1740476 [+], 711conserved hypothetical protein
8GALLO_16491740511..1741413 [-], 903Putative peptidoglycan linked serine rich protein (LPXTG motif)
9GALLO_16501741431..1741997 [-], 567conserved hypothetical secreted protein
10GALLO_16511742008..1742706 [-], 699putative sortase, A-type family
11GALLO_16521742722..1744116 [-], 1395conserved hypothetical secreted protein
12GALLO_16531744118..1746262 [-], 2145conserved hypothetical membrane proteinYddG, T4SS component 
13GALLO_16541746272..1748773 [-], 2502putative conjugative transposon proteinYddE, T4SS component 
14GALLO_16551748915..1749445 [+], 531hypothetical protein
15GALLO_16561749431..1749697 [-], 267hypothetical protein
16GALLO_16571749757..1750167 [-], 411conserved hypothetical proteinYddD, T4SS component 
17GALLO_16581750171..1750437 [-], 267conserved hypothetical protein
18GALLO_16591750473..1751447 [-], 975conserved hypothetical secreted proteinYddB, T4SS component 
19GALLO_16601751466..1751900 [-], 435conserved hypothetical protein
20GALLO_16611751917..1752285 [-], 369hypothetical protein
21GALLO_16621752285..1752500 [-], 216hypothetical protein
22GALLO_16631752511..1752993 [-], 483conserved hypothetical protein
23GALLO_16641753012..1753512 [-], 501hypothetical protein
24GALLO_16651753563..1753835 [-], 273conserved hypothetical protein
25GALLO_16661754053..1754463 [-], 411putative transcriptional regulator
26GALLO_16671754526..1754720 [-], 195hypothetical protein
27GALLO_16681754804..1755202 [-], 399conserved hypothetical protein
28GALLO_16691755217..1755480 [-], 264hypothetical protein
29GALLO_16701755507..1756757 [-], 1251putative transcriptional regulator, Cro/CI family
30GALLO_16711756783..1756992 [-], 210Hypothetical protein
31GALLO_16721757031..1758740 [-], 1710putative DNA segregation ATPase, FtsK/SpoIIIE familyYdcQ, T4SS component 
32GALLO_16731758751..1759218 [-], 468conserved hypothetical protein
33GALLO_16741759218..1759529 [-], 312conserved hypothetical protein
34GALLO_16751759598..1761877 [-], 2280Putative peptidoglycan linked protein (LPXTG motif)PrgB, T4SS component 
35GALLO_16761762086..1763303 [-], 1218putative integraseIntegrase 
36GALLO_16771763385..1763588 [-], 204Tn916 conserved hypothetical protein, putative excisionase
37GALLO_16781763572..1763823 [+], 252Tn916 hypothetical protein
38GALLO_16791764049..1764279 [-], 231Tn916 conserved hypothetical protein
39GALLO_16801764276..1764698 [-], 423Tn916 conserved hypothetical protein
40GALLO_16811765203..1765556 [+], 354putative transcriptional regulator (Tn916)
41GALLO_16821765616..1765804 [-], 189Tn916 conserved hypothetical protein
42GALLO_16831766216..1767466 [+], 1251Transposase
43GALLO_16841767699..1768682 [-], 984putative plasmid replication protein
44GALLO_16851768959..1770221 [-], 1263putative plasmid recombination/mobilization proteinRelaxase, MOBV Family
45tetL1770785..1772161 [-], 1377tetracycline resistance protein
46tetM1772355..1774274 [-], 1920tetracycline resistence protein TetM
47GALLO_16881774290..1774376 [-], 87TetM leader peptide
48GALLO_16891774651..1775583 [-], 933Tn916 conserved hypothetical proteinOrf13_Tn, T4SS component 
49GALLO_16901775580..1776581 [-], 1002Tn916 conserved hypothetical proteinOrf14_Tn, T4SS component 
50GALLO_16911776578..1778755 [-], 2178Tn916 conserved hypothetical proteinOrf15_Tn, T4SS component 
51GALLO_16921778758..1781205 [-], 2448Tn916 conserved hypothetical proteinOrf16_Tn, T4SS component 
52GALLO_16931781189..1781581 [-], 393Tn916 conserved hypothetical proteinOrf17_Tn, T4SS component 
53GALLO_16941781670..1782167 [-], 498Tn916 conserved hypothetical protein
54GALLO_16951782284..1782505 [-], 222Tn916 conserved hypothetical proteinOrf19_Tn, T4SS component 
55GALLO_16961782548..1783753 [-], 1206putative transcriptional regulator, Cro/CI family (Tn916)Relaxase, MOBT Family
56GALLO_16971783931..1785316 [-], 1386Tn916 conserved hypothetical protein, putative translocaseOrf21_Tn, T4SS component 
57GALLO_16981785345..1785728 [-], 384Tn916 conserved hypothetical protein
58GALLO_16991785747..1786061 [-], 315Tn916 conserved hypothetical protein
59GALLO_17001786084..1786203 [-], 120Tn916 conserved hypothetical protein
60GALLO_17011786497..1786814 [-], 318conserved hypothetical protein
61GALLO_17021786831..1787268 [-], 438conserved hypothetical protein
62GALLO_17031787265..1787519 [-], 255conserved hypothetical protein
63GALLO_17041787572..1787832 [-], 261conserved hypothetical protein
64GALLO_17051788021..1788431 [-], 411conserved hypothetical protein
65GALLO_17061788367..1788717 [-], 351conserved hypothetical protein
66GALLO_17071789020..1789607 [-], 588conserved hypothetical protein
67GALLO_17081790579..1790932 [+], 354putative transcriptional regulator, Cro/CI family
68GALLO_17091791013..1791819 [+], 807conserved hypothetical protein
69GALLO_17101791911..1792294 [-], 384conserved hypothetical lipoprotein
 
flank Flanking regions

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins58Fasta
(1) Rusniok C; Couve E; Da Cunha V; El Gana R; Zidane N; Bouchier C; Poyart C; Leclercq R; Trieu-Cuot P; Glaser P (2010). Genome sequence of Streptococcus gallolyticus: insights into its adaptation to the bovine rumen and its ability to cause endocarditis. J Bacteriol. 192(8):2266-76. [PubMed:20139183]
 

Genomics & Bioinformatics Group in MML, SJTU