ICEberg
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ICE family: ICEMlSym(R7A)
ICEMlSym(R7A) is a well studied ICE. We classified ICE that that has significant sequence alignment and syntenic 'core' structure with ICEMlSym(R7A) into the ICEMlSym(R7A) family.

#IDICE nameStrainReplicon
175 experimental ICEMlSym(R7A)Mesorhizobium loti R7A-
2133 in_silico ICEMloMAF-1Mesorhizobium loti MAFF303099NC_002678
experimental Data derived from experimental literature
in_silico Putative ICEs predicted by bioinformatic methods
ElementNo. of sequencesDownloadAlignment
Proteins581FastaMultiple protein sequence alignment by MUSCLE online
ICEs1Fasta-
(1) Ramsay JP et al. (2012). A widely conserved molecular switch controls quorum sensing and symbiosis island transfer in Mesorhizobium loti through expression of a novel antiactivator. Mol Microbiol. . [PudMed:23106190] experimental
(2) Ramsay JP et al. (2009). A LuxRI-family regulatory system controls excision and transfer of the Mesorhizobium loti strain R7A symbiosis island by activating expression of two conserved hypothetical genes. Mol Microbiol. 73(6):1141-55. [PudMed:19682258] experimental
(3) Ramsay JP et al. (2006). Excision and transfer of the Mesorhizobium loti R7A symbiosis island requires an integrase IntS, a novel recombination directionality factor RdfS, and a putative relaxase RlxS. Mol Microbiol. 62(3):723-34. [PudMed:17076666] experimental
(4) Sullivan JT et al. (2002). Comparative sequence analysis of the symbiosis island of Mesorhizobium loti strain R7A. J Bacteriol. 184(11):3086-95. [PudMed:12003951] experimental
(5) Kaneko T et al. (2000). Complete genome structure of the nitrogen-fixing symbiotic bacterium Mesorhizobium loti. DNA Res. 7(6):331-8. [PudMed:11214968]
(6) Sullivan JT et al. (1998). Evolution of rhizobia by acquisition of a 500-kb symbiosis island that integrates into a phe-tRNA gene. Proc Natl Acad Sci U S A. 95(9):5145-9. [PudMed:9560243] experimental
 
experimental experimental literature