| ICE family: ICEF-I/II | ||||
| ICEF-I is a well studied ICE. We selected ICEF-I as a reference and defined ICEF-I/II family. We classified ICE that has sequence samilarity with ICEF-I into this family. | ||||
| # | ID | ICE name | Strain | Replicon |
| 1 | 72  | ICEF-I | Mycoplasma fermentans PG18 | - |
| 2 | 73 | ICEF-II | Mycoplasma fermentans PG18 | - |
| 3 | 413  | ICEF-IA(M64) | Mycoplasma fermentans M64 | NC_014921 |
| 4 | 416 | ICEF-IIA(M64) | Mycoplasma fermentans M64 | NC_014921 |
| 5 | 418 | ICEF-IIC(M64) | Mycoplasma fermentans M64 | NC_014921 |
| 6 | 419 | ICEF-IIB(M64) | Mycoplasma fermentans M64 | NC_014921 |
| Data derived from experimental literature | ||||
| Putative ICEs predicted by bioinformatic methods | ||||
| Element | No. of sequences | Download | Alignment |
| Proteins | 103 | Fasta | Multiple protein sequence alignment by MUSCLE online |
| ICEs | 5 | Fasta | Nucleotide sequence comparison by webACT |
| (1) Shu HW et al. (2011). Genome Sequence of the Repetitive-Sequence-Rich Mycoplasma fermentans Strain M64. J Bacteriol. 193(16):4302-3. [PudMed:21642450] |
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(2) Calcutt MJ et al. (2002). Molecular genetic analysis of ICEF, an integrative conjugal element that is present as a repetitive sequence in the chromosome of Mycoplasma fermentans PG18. J Bacteriol. 184(24):6929-41. [PudMed:12446643]
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| experimental literature |