T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 53755..93726
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U1526_RS00300 (pPan61-incI1__00061) | 51471..53762 | - | 2292 | WP_001289275 | F-type conjugative transfer protein TrbC | - |
| U1526_RS00305 (pPan61-incI1__00062) | 53755..54825 | - | 1071 | WP_000151576 | IncI1-type conjugal transfer protein TrbB | trbB |
| U1526_RS00310 (pPan61-incI1__00063) | 54844..56052 | - | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| U1526_RS00315 (pPan61-incI1__00064) | 56344..56496 | + | 153 | WP_001303307 | Hok/Gef family protein | - |
| U1526_RS00320 (pPan61-incI1__00065) | 56568..56819 | - | 252 | WP_001291965 | hypothetical protein | - |
| U1526_RS00325 | 57319..57414 | + | 96 | WP_001303310 | DinQ-like type I toxin DqlB | - |
| U1526_RS00330 (pPan61-incI1__00066) | 57479..57616 | - | 138 | WP_047088497 | hypothetical protein | - |
| U1526_RS00335 (pPan61-incI1__00067) | 57661..58887 | - | 1227 | WP_024186316 | RNA-guided endonuclease TnpB family protein | - |
| U1526_RS00340 (pPan61-incI1__00068) | 58946..59350 | + | 405 | WP_001175009 | IS200/IS605 family transposase | - |
| U1526_RS00345 (pPan61-incI1__00069) | 59682..59891 | - | 210 | WP_032178830 | hemolysin expression modulator Hha | - |
| U1526_RS00350 (pPan61-incI1__00070) | 59989..60651 | - | 663 | WP_000644794 | plasmid IncI1-type surface exclusion protein ExcA | - |
| U1526_RS00355 (pPan61-incI1__00071) | 60722..62890 | - | 2169 | WP_000698368 | DotA/TraY family protein | traY |
| U1526_RS00360 (pPan61-incI1__00072) | 62987..63571 | - | 585 | WP_001037985 | IncI1-type conjugal transfer protein TraX | - |
| U1526_RS00365 (pPan61-incI1__00073) | 63600..64802 | - | 1203 | WP_001189156 | IncI1-type conjugal transfer protein TraW | traW |
| U1526_RS00370 (pPan61-incI1__00074) | 64769..65383 | - | 615 | WP_000337400 | IncI1-type conjugal transfer protein TraV | traV |
| U1526_RS00375 (pPan61-incI1__00075) | 65383..68427 | - | 3045 | WP_001024780 | IncI1-type conjugal transfer protein TraU | traU |
| U1526_RS00380 (pPan61-incI1__00076) | 68517..69317 | - | 801 | WP_024126043 | IncI1-type conjugal transfer protein TraT | traT |
| U1526_RS00385 (pPan61-incI1__00077) | 69301..69489 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| U1526_RS00390 (pPan61-incI1__00078) | 69553..69957 | - | 405 | WP_000086958 | IncI1-type conjugal transfer protein TraR | traR |
| U1526_RS00395 (pPan61-incI1__00079) | 70008..70535 | - | 528 | WP_024126044 | conjugal transfer protein TraQ | traQ |
| U1526_RS00400 (pPan61-incI1__00080) | 70535..71239 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| U1526_RS00405 (pPan61-incI1__00081) | 71239..72528 | - | 1290 | WP_001272003 | conjugal transfer protein TraO | traO |
| U1526_RS00410 (pPan61-incI1__00082) | 72531..73514 | - | 984 | WP_001191877 | IncI1-type conjugal transfer protein TraN | traN |
| U1526_RS00415 (pPan61-incI1__00083) | 73525..74217 | - | 693 | WP_000138550 | DotI/IcmL family type IV secretion protein | traM |
| U1526_RS00420 (pPan61-incI1__00084) | 74214..74561 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| U1526_RS00425 (pPan61-incI1__00085) | 74579..78346 | - | 3768 | WP_001141527 | LPD7 domain-containing protein | - |
| U1526_RS00430 (pPan61-incI1__00086) | 78436..78987 | - | 552 | WP_000014583 | phospholipase D family protein | - |
| U1526_RS00435 (pPan61-incI1__00087) | 79002..79292 | - | 291 | WP_001299214 | hypothetical protein | traK |
| U1526_RS00440 (pPan61-incI1__00088) | 79289..80437 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| U1526_RS00445 (pPan61-incI1__00089) | 80434..81252 | - | 819 | WP_000646098 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| U1526_RS00450 (pPan61-incI1__00090) | 81249..81707 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| U1526_RS00455 (pPan61-incI1__00091) | 82102..82686 | - | 585 | WP_000977522 | histidine phosphatase family protein | - |
| U1526_RS00460 (pPan61-incI1__00092) | 82746..83948 | - | 1203 | WP_000976351 | conjugal transfer protein TraF | - |
| U1526_RS00465 (pPan61-incI1__00093) | 84033..84857 | - | 825 | WP_001238939 | conjugal transfer protein TraE | traE |
| U1526_RS00470 (pPan61-incI1__00094) | 85008..86162 | - | 1155 | WP_001139957 | tyrosine-type recombinase/integrase | - |
| U1526_RS00475 | 86161..86514 | + | 354 | WP_001393368 | hypothetical protein | - |
| U1526_RS00480 | 87578..87799 | + | 222 | Protein_95 | prepilin | - |
| U1526_RS00485 (pPan61-incI1__00095) | 87796..89220 | - | 1425 | WP_001389385 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| U1526_RS00490 (pPan61-incI1__00096) | 89220..89876 | - | 657 | WP_001193553 | prepilin peptidase | - |
| U1526_RS00495 (pPan61-incI1__00097) | 89861..90421 | - | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| U1526_RS00500 (pPan61-incI1__00098) | 90431..91045 | - | 615 | WP_000959785 | type 4 pilus major pilin | - |
| U1526_RS00505 (pPan61-incI1__00099) | 91063..92160 | - | 1098 | WP_001208805 | type II secretion system F family protein | - |
| U1526_RS00510 (pPan61-incI1__00100) | 92173..93726 | - | 1554 | WP_000362202 | GspE/PulE family protein | virB11 |
| U1526_RS00515 (pPan61-incI1__00101) | 93737..94189 | - | 453 | WP_001247336 | type IV pilus biogenesis protein PilP | - |
| U1526_RS00520 (pPan61-incI1__00102) | 94176..95471 | - | 1296 | WP_000752774 | type 4b pilus protein PilO2 | - |
| U1526_RS00525 (pPan61-incI1__00103) | 95464..97146 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| U1526_RS00530 (pPan61-incI1__00104) | 97160..97597 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| U1526_RS00535 (pPan61-incI1__00105) | 97597..98664 | - | 1068 | WP_000742600 | type IV pilus biogenesis lipoprotein PilL | - |