T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 104661..133576
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FR888_RS26875 (FR888_26870) | 104661..106970 | - | 2310 | WP_151523152 | type IV conjugative transfer system coupling protein TraD | virb4 |
| FR888_RS28690 | 107097..107786 | - | 690 | WP_013023831 | hypothetical protein | - |
| FR888_RS26885 (FR888_26880) | 107979..108708 | - | 730 | Protein_118 | conjugal transfer complement resistance protein TraT | - |
| FR888_RS26895 (FR888_26890) | 108897..109427 | - | 531 | WP_074187241 | conjugal transfer protein TraS | - |
| FR888_RS26900 (FR888_26895) | 109430..112279 | - | 2850 | WP_042922342 | conjugal transfer mating-pair stabilization protein TraG | traG |
| FR888_RS26905 (FR888_26900) | 112279..113658 | - | 1380 | WP_074187239 | conjugal transfer pilus assembly protein TraH | traH |
| FR888_RS26910 (FR888_26905) | 113636..114079 | - | 444 | WP_015065638 | F-type conjugal transfer protein TrbF | - |
| FR888_RS26915 (FR888_26910) | 114124..114681 | - | 558 | WP_004152678 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| FR888_RS26920 (FR888_26915) | 114653..114892 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FR888_RS26925 (FR888_26920) | 114903..115655 | - | 753 | WP_042922347 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| FR888_RS26930 (FR888_26925) | 115676..116002 | - | 327 | WP_016529362 | hypothetical protein | - |
| FR888_RS29180 (FR888_26930) | 116048..116233 | - | 186 | WP_042922350 | hypothetical protein | - |
| FR888_RS26940 (FR888_26935) | 116230..116466 | - | 237 | WP_042922352 | conjugal transfer protein TrbE | - |
| FR888_RS26945 (FR888_26940) | 116498..118453 | - | 1956 | WP_015065636 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| FR888_RS26950 (FR888_26945) | 118512..119150 | - | 639 | WP_015065635 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| FR888_RS26955 (FR888_26950) | 119163..120152 | - | 990 | WP_009309872 | conjugal transfer pilus assembly protein TraU | traU |
| FR888_RS26960 (FR888_26955) | 120149..120538 | - | 390 | WP_042922355 | hypothetical protein | - |
| FR888_RS26965 (FR888_26960) | 120580..121206 | - | 627 | WP_009309871 | type-F conjugative transfer system protein TraW | traW |
| FR888_RS26970 (FR888_26965) | 121206..121595 | - | 390 | WP_004152591 | type-F conjugative transfer system protein TrbI | - |
| FR888_RS26975 (FR888_26970) | 121595..124234 | - | 2640 | WP_042922359 | type IV secretion system protein TraC | virb4 |
| FR888_RS26980 (FR888_26975) | 124306..124704 | - | 399 | WP_023179972 | hypothetical protein | - |
| FR888_RS26995 (FR888_26990) | 125082..125486 | - | 405 | WP_004197817 | hypothetical protein | - |
| FR888_RS27000 (FR888_26995) | 125553..125864 | - | 312 | WP_004195240 | hypothetical protein | - |
| FR888_RS27005 (FR888_27000) | 125865..126083 | - | 219 | WP_004195235 | hypothetical protein | - |
| FR888_RS27010 (FR888_27005) | 126189..126599 | - | 411 | WP_004152499 | hypothetical protein | - |
| FR888_RS27015 (FR888_27010) | 126731..127315 | - | 585 | WP_032441881 | type IV conjugative transfer system lipoprotein TraV | traV |
| FR888_RS27020 (FR888_27015) | 127429..128853 | - | 1425 | WP_042922367 | F-type conjugal transfer pilus assembly protein TraB | traB |
| FR888_RS27025 (FR888_27020) | 128853..129593 | - | 741 | WP_015065528 | type-F conjugative transfer system secretin TraK | traK |
| FR888_RS27030 (FR888_27025) | 129580..130146 | - | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| FR888_RS27035 (FR888_27030) | 130166..130471 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| FR888_RS27040 (FR888_27035) | 130485..130853 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| FR888_RS27045 (FR888_27040) | 130907..131278 | - | 372 | WP_004208838 | TraY domain-containing protein | - |
| FR888_RS27050 (FR888_27045) | 131362..132048 | - | 687 | WP_071561590 | transcriptional regulator TraJ family protein | - |
| FR888_RS27055 (FR888_27050) | 132264..132656 | - | 393 | WP_032441878 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| FR888_RS27060 (FR888_27055) | 133091..133576 | + | 486 | WP_001568108 | transglycosylase SLT domain-containing protein | virB1 |
| FR888_RS27065 (FR888_27060) | 133609..133938 | - | 330 | WP_192802326 | DUF5983 family protein | - |
| FR888_RS27070 (FR888_27065) | 133971..134792 | - | 822 | WP_023316395 | DUF932 domain-containing protein | - |
| FR888_RS27080 (FR888_27075) | 135620..136033 | - | 414 | WP_021312979 | type II toxin-antitoxin system HigA family antitoxin | - |
| FR888_RS27085 (FR888_27080) | 136034..136312 | - | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| FR888_RS27090 (FR888_27085) | 136302..136622 | - | 321 | WP_004152720 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| FR888_RS27095 (FR888_27090) | 136703..136927 | - | 225 | WP_014343499 | hypothetical protein | - |
| FR888_RS27100 (FR888_27095) | 136938..137150 | - | 213 | WP_019706020 | hypothetical protein | - |
| FR888_RS27105 (FR888_27100) | 137211..137567 | - | 357 | WP_019706019 | hypothetical protein | - |