T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 39928..83411
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL734_RS24380 (NL734_24380) | 37644..39935 | - | 2292 | WP_011264051 | F-type conjugative transfer protein TrbC | - |
| NL734_RS24385 (NL734_24385) | 39928..40998 | - | 1071 | WP_011264050 | IncI1-type conjugal transfer protein TrbB | trbB |
| NL734_RS24390 (NL734_24390) | 41017..42225 | - | 1209 | WP_011264049 | IncI1-type conjugal transfer protein TrbA | trbA |
| NL734_RS24395 (NL734_24395) | 42532..43314 | - | 783 | WP_023063753 | protein FinQ | - |
| NL734_RS24400 (NL734_24400) | 43510..43827 | + | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| NL734_RS24405 (NL734_24405) | 43824..44357 | - | 534 | WP_001221666 | lipocalin family protein | - |
| NL734_RS24410 (NL734_24410) | 44451..45596 | - | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| NL734_RS24415 (NL734_24415) | 45920..47182 | - | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| NL734_RS24420 (NL734_24420) | 47335..47709 | - | 375 | WP_223349261 | hypothetical protein | - |
| NL734_RS24425 (NL734_24425) | 48030..48182 | + | 153 | WP_001387489 | Hok/Gef family protein | - |
| NL734_RS24430 (NL734_24430) | 48254..48505 | - | 252 | WP_001291964 | hypothetical protein | - |
| NL734_RS24975 | 49006..49101 | + | 96 | WP_000609148 | DinQ-like type I toxin DqlB | - |
| NL734_RS24440 (NL734_24440) | 49166..49342 | - | 177 | WP_001054897 | hypothetical protein | - |
| NL734_RS24445 (NL734_24445) | 49734..49943 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| NL734_RS24450 (NL734_24450) | 50015..50677 | - | 663 | WP_000644796 | plasmid IncI1-type surface exclusion protein ExcA | - |
| NL734_RS24455 (NL734_24455) | 50748..52916 | - | 2169 | WP_023518847 | DotA/TraY family protein | traY |
| NL734_RS24460 (NL734_24460) | 53013..53597 | - | 585 | WP_001746157 | IncI1-type conjugal transfer protein TraX | - |
| NL734_RS24465 (NL734_24465) | 53626..54828 | - | 1203 | WP_001189160 | IncI1-type conjugal transfer protein TraW | traW |
| NL734_RS24470 (NL734_24470) | 54795..55409 | - | 615 | WP_000337399 | IncI1-type conjugal transfer protein TraV | traV |
| NL734_RS24475 (NL734_24475) | 55409..58453 | - | 3045 | WP_023518848 | IncI1-type conjugal transfer protein TraU | traU |
| NL734_RS24480 (NL734_24480) | 58543..59343 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| NL734_RS24485 (NL734_24485) | 59327..59515 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| NL734_RS24490 (NL734_24490) | 59579..59983 | - | 405 | WP_000086965 | IncI1-type conjugal transfer protein TraR | traR |
| NL734_RS24495 (NL734_24495) | 60034..60561 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| NL734_RS24500 (NL734_24500) | 60561..61265 | - | 705 | WP_001493811 | IncI1-type conjugal transfer protein TraP | traP |
| NL734_RS24505 (NL734_24505) | 61265..62554 | - | 1290 | WP_011264042 | conjugal transfer protein TraO | traO |
| NL734_RS24510 (NL734_24510) | 62557..63540 | - | 984 | WP_001191880 | IncI1-type conjugal transfer protein TraN | traN |
| NL734_RS24515 (NL734_24515) | 63551..64243 | - | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| NL734_RS24520 (NL734_24520) | 64240..64587 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| NL734_RS24525 (NL734_24525) | 64605..68372 | - | 3768 | WP_023518849 | LPD7 domain-containing protein | - |
| NL734_RS24530 (NL734_24530) | 68462..69013 | - | 552 | WP_000014584 | phospholipase D family protein | - |
| NL734_RS24535 (NL734_24535) | 69028..69318 | - | 291 | WP_001299214 | hypothetical protein | traK |
| NL734_RS24540 (NL734_24540) | 69315..70463 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| NL734_RS24545 (NL734_24545) | 70460..71278 | - | 819 | WP_167654534 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| NL734_RS24550 (NL734_24550) | 71275..71733 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| NL734_RS24555 (NL734_24555) | 72128..72712 | - | 585 | WP_000977522 | histidine phosphatase family protein | - |
| NL734_RS24560 (NL734_24560) | 72772..73974 | - | 1203 | WP_000976351 | conjugal transfer protein TraF | - |
| NL734_RS24565 (NL734_24565) | 74060..74884 | - | 825 | WP_023518851 | conjugal transfer protein TraE | traE |
| NL734_RS24570 (NL734_24570) | 75035..76189 | - | 1155 | WP_001139955 | tyrosine-type recombinase/integrase | - |
| NL734_RS24575 (NL734_24575) | 76188..76472 | + | 285 | WP_187642572 | pilus assembly protein PilV | - |
| NL734_RS25105 | 77273..77497 | + | 225 | Protein_87 | hypothetical protein | - |
| NL734_RS24580 (NL734_24580) | 77494..78930 | - | 1437 | WP_015058206 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| NL734_RS24585 (NL734_24585) | 78918..79574 | - | 657 | WP_001401940 | A24 family peptidase | - |
| NL734_RS24590 (NL734_24590) | 79559..80119 | - | 561 | WP_000014005 | lytic transglycosylase domain-containing protein | virB1 |
| NL734_RS24595 (NL734_24595) | 80129..80743 | - | 615 | WP_000908227 | type 4 pilus major pilin | - |
| NL734_RS24600 (NL734_24600) | 80760..81845 | - | 1086 | WP_001208802 | type II secretion system F family protein | - |
| NL734_RS24605 (NL734_24605) | 81858..83411 | - | 1554 | WP_023518854 | GspE/PulE family protein | virB11 |
| NL734_RS24610 (NL734_24610) | 83422..83874 | - | 453 | WP_001247337 | type IV pilus biogenesis protein PilP | - |
| NL734_RS24615 (NL734_24615) | 83861..85156 | - | 1296 | WP_023518855 | type 4b pilus protein PilO2 | - |
| NL734_RS24620 (NL734_24620) | 85149..86831 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| NL734_RS24625 (NL734_24625) | 86845..87282 | - | 438 | WP_000539806 | type IV pilus biogenesis protein PilM | - |
| NL734_RS24630 (NL734_24630) | 87282..88349 | - | 1068 | WP_001360287 | type IV pilus biogenesis lipoprotein PilL | - |