T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 28293..56599
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECO25NV_RS25505 (ECO25NV_49240) | 23562..24212 | + | 651 | WP_001487415 | IS66-like element accessory protein TnpA | - |
| ECO25NV_RS25510 (ECO25NV_49250) | 24212..24559 | + | 348 | WP_000624618 | IS66 family insertion sequence element accessory protein TnpB | - |
| ECO25NV_RS25515 (ECO25NV_49260) | 24579..26150 | + | 1572 | WP_199805184 | IS66 family transposase | - |
| ECO25NV_RS26230 | 26181..26468 | - | 288 | Protein_39 | hypothetical protein | - |
| ECO25NV_RS25520 (ECO25NV_49290) | 26768..27064 | + | 297 | WP_001272251 | hypothetical protein | - |
| ECO25NV_RS25525 (ECO25NV_49300) | 27175..27996 | + | 822 | WP_001234445 | DUF932 domain-containing protein | - |
| ECO25NV_RS25530 (ECO25NV_49310) | 28293..28895 | - | 603 | WP_000243713 | transglycosylase SLT domain-containing protein | - |
| ECO25NV_RS25535 (ECO25NV_49320) | 29216..29599 | + | 384 | WP_001151529 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| ECO25NV_RS25540 (ECO25NV_49330) | 29791..30438 | + | 648 | WP_000332523 | transcriptional regulator TraJ family protein | - |
| ECO25NV_RS25545 (ECO25NV_49340) | 30558..30785 | + | 228 | WP_000589556 | conjugal transfer relaxosome protein TraY | - |
| ECO25NV_RS25550 (ECO25NV_49350) | 30819..31181 | + | 363 | WP_012881131 | type IV conjugative transfer system pilin TraA | - |
| ECO25NV_RS25555 (ECO25NV_49360) | 31196..31507 | + | 312 | WP_000012100 | type IV conjugative transfer system protein TraL | traL |
| ECO25NV_RS25560 (ECO25NV_49370) | 31529..32095 | + | 567 | WP_000399780 | type IV conjugative transfer system protein TraE | traE |
| ECO25NV_RS25565 (ECO25NV_49380) | 32082..32810 | + | 729 | WP_001230769 | type-F conjugative transfer system secretin TraK | traK |
| ECO25NV_RS25570 (ECO25NV_49390) | 32810..34237 | + | 1428 | WP_012881130 | F-type conjugal transfer pilus assembly protein TraB | traB |
| ECO25NV_RS25575 (ECO25NV_49400) | 34227..34817 | + | 591 | WP_012881129 | conjugal transfer pilus-stabilizing protein TraP | - |
| ECO25NV_RS25580 (ECO25NV_49410) | 34804..35124 | + | 321 | WP_012881128 | conjugal transfer protein TrbD | - |
| ECO25NV_RS25585 (ECO25NV_49420) | 35121..35636 | + | 516 | WP_000809881 | type IV conjugative transfer system lipoprotein TraV | traV |
| ECO25NV_RS25590 (ECO25NV_49430) | 35771..35992 | + | 222 | WP_001278683 | conjugal transfer protein TraR | - |
| ECO25NV_RS25595 (ECO25NV_49440) | 35985..36461 | + | 477 | WP_012881127 | hypothetical protein | - |
| ECO25NV_RS25600 (ECO25NV_49450) | 36560..36778 | + | 219 | WP_000556745 | hypothetical protein | - |
| ECO25NV_RS25605 (ECO25NV_49460) | 36806..37153 | + | 348 | WP_000836682 | hypothetical protein | - |
| ECO25NV_RS25610 (ECO25NV_49470) | 37279..39909 | + | 2631 | WP_000069772 | type IV secretion system protein TraC | virb4 |
| ECO25NV_RS25615 (ECO25NV_49480) | 39906..40292 | + | 387 | WP_000214084 | type-F conjugative transfer system protein TrbI | - |
| ECO25NV_RS25620 (ECO25NV_49490) | 40289..40921 | + | 633 | WP_001203720 | type-F conjugative transfer system protein TraW | traW |
| ECO25NV_RS25625 (ECO25NV_49500) | 40918..41910 | + | 993 | WP_000830849 | conjugal transfer pilus assembly protein TraU | traU |
| ECO25NV_RS25630 (ECO25NV_49510) | 41940..42245 | + | 306 | WP_000224418 | hypothetical protein | - |
| ECO25NV_RS25635 (ECO25NV_49520) | 42254..42892 | + | 639 | WP_012881126 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| ECO25NV_RS25640 (ECO25NV_49530) | 42889..44739 | + | 1851 | WP_012881125 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| ECO25NV_RS25645 (ECO25NV_49540) | 44766..45023 | + | 258 | WP_000864353 | conjugal transfer protein TrbE | - |
| ECO25NV_RS25650 (ECO25NV_49550) | 45016..45759 | + | 744 | WP_001030371 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| ECO25NV_RS25655 | 45773..46114 | + | 342 | WP_000556795 | conjugal transfer protein TrbA | - |
| ECO25NV_RS25660 (ECO25NV_49560) | 46095..46430 | - | 336 | WP_000736414 | hypothetical protein | - |
| ECO25NV_RS25665 (ECO25NV_49570) | 46511..46795 | + | 285 | WP_000624107 | type-F conjugative transfer system pilin chaperone TraQ | - |
| ECO25NV_RS25670 (ECO25NV_49580) | 46782..47327 | + | 546 | WP_000059830 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| ECO25NV_RS25675 (ECO25NV_49590) | 47257..47604 | + | 348 | WP_011666494 | P-type conjugative transfer protein TrbJ | - |
| ECO25NV_RS25680 (ECO25NV_49600) | 47585..47977 | + | 393 | WP_000659962 | F-type conjugal transfer protein TrbF | - |
| ECO25NV_RS25685 (ECO25NV_49610) | 47964..49337 | + | 1374 | WP_139570830 | conjugal transfer pilus assembly protein TraH | traH |
| ECO25NV_RS25690 (ECO25NV_49620) | 49334..52159 | + | 2826 | WP_139570829 | conjugal transfer mating-pair stabilization protein TraG | traG |
| ECO25NV_RS25695 (ECO25NV_49630) | 52156..52665 | + | 510 | WP_000628111 | conjugal transfer entry exclusion protein TraS | - |
| ECO25NV_RS25700 (ECO25NV_49640) | 52679..53410 | + | 732 | WP_012881123 | conjugal transfer complement resistance protein TraT | - |
| ECO25NV_RS25705 (ECO25NV_49650) | 53613..54350 | + | 738 | WP_012881122 | hypothetical protein | - |
| ECO25NV_RS25710 (ECO25NV_49660) | 54401..56599 | + | 2199 | WP_025746094 | type IV conjugative transfer system coupling protein TraD | virb4 |