T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 81951..107142
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DPF84_RS24625 (DPF84_24620) | 77976..78209 | - | 234 | WP_001191892 | hypothetical protein | - |
| DPF84_RS24630 (DPF84_24625) | 78191..78808 | - | 618 | WP_001249396 | hypothetical protein | - |
| DPF84_RS24635 (DPF84_24630) | 78976..81954 | + | 2979 | WP_001337757 | MobH family relaxase | - |
| DPF84_RS24640 (DPF84_24635) | 81951..83816 | + | 1866 | WP_000178856 | conjugative transfer system coupling protein TraD | virb4 |
| DPF84_RS24645 (DPF84_24640) | 83866..84411 | + | 546 | WP_000228720 | hypothetical protein | - |
| DPF84_RS24650 (DPF84_24645) | 84368..84997 | + | 630 | WP_000743450 | DUF4400 domain-containing protein | tfc7 |
| DPF84_RS24655 (DPF84_24650) | 85007..85453 | + | 447 | WP_000122506 | hypothetical protein | - |
| DPF84_RS24660 (DPF84_24655) | 85463..85840 | + | 378 | WP_000869261 | hypothetical protein | - |
| DPF84_RS24665 (DPF84_24660) | 85840..86502 | + | 663 | WP_001231463 | hypothetical protein | - |
| DPF84_RS28410 | 86683..86826 | + | 144 | WP_001275801 | hypothetical protein | - |
| DPF84_RS24670 (DPF84_24665) | 86838..87203 | + | 366 | WP_001052531 | hypothetical protein | - |
| DPF84_RS24675 (DPF84_24670) | 87348..87629 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| DPF84_RS24680 (DPF84_24675) | 87626..88252 | + | 627 | WP_001049716 | TraE/TraK family type IV conjugative transfer system protein | traE |
| DPF84_RS24685 (DPF84_24680) | 88236..89153 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| DPF84_RS24690 (DPF84_24685) | 89153..90466 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| DPF84_RS24695 (DPF84_24690) | 90463..91041 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| DPF84_RS24700 (DPF84_24695) | 91045..91437 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| DPF84_RS24705 (DPF84_24700) | 91638..97169 | + | 5532 | WP_000606833 | Ig-like domain-containing protein | - |
| DPF84_RS24710 (DPF84_24705) | 97318..98025 | + | 708 | WP_001259347 | DsbC family protein | - |
| DPF84_RS24715 (DPF84_24710) | 98022..100469 | + | 2448 | WP_000637386 | type IV secretion system protein TraC | virb4 |
| DPF84_RS24720 (DPF84_24715) | 100484..100801 | + | 318 | WP_000351984 | hypothetical protein | - |
| DPF84_RS24725 (DPF84_24720) | 100798..101328 | + | 531 | WP_001010738 | S26 family signal peptidase | - |
| DPF84_RS24730 (DPF84_24725) | 101291..102556 | + | 1266 | WP_000621288 | TrbC family F-type conjugative pilus assembly protein | traW |
| DPF84_RS24735 (DPF84_24730) | 102553..103224 | + | 672 | WP_001337754 | EAL domain-containing protein | - |
| DPF84_RS24740 (DPF84_24735) | 103224..104228 | + | 1005 | WP_043940352 | TraU family protein | traU |
| DPF84_RS24745 (DPF84_24740) | 104344..107142 | + | 2799 | WP_001256487 | conjugal transfer mating pair stabilization protein TraN | traN |
| DPF84_RS24750 (DPF84_24745) | 107181..108041 | - | 861 | WP_000709517 | hypothetical protein | - |
| DPF84_RS24755 (DPF84_24750) | 108164..108805 | - | 642 | WP_000796664 | hypothetical protein | - |
| DPF84_RS24760 (DPF84_24755) | 109099..109419 | + | 321 | WP_000547566 | hypothetical protein | - |
| DPF84_RS24765 (DPF84_24760) | 109723..109908 | + | 186 | WP_001186917 | hypothetical protein | - |
| DPF84_RS24770 (DPF84_24765) | 110128..111096 | + | 969 | WP_000085162 | AAA family ATPase | - |
| DPF84_RS24775 (DPF84_24770) | 111107..112015 | + | 909 | WP_000739139 | hypothetical protein | - |