T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 67059..106206
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HVV54_RS23105 (HVV54_23105) | 64775..67066 | - | 2292 | WP_001289276 | F-type conjugative transfer protein TrbC | - |
| HVV54_RS23110 (HVV54_23110) | 67059..68129 | - | 1071 | WP_000151583 | IncI1-type conjugal transfer protein TrbB | trbB |
| HVV54_RS23115 (HVV54_23115) | 68148..69356 | - | 1209 | WP_181465534 | IncI1-type conjugal transfer protein TrbA | trbA |
| HVV54_RS23120 (HVV54_23120) | 69648..69800 | + | 153 | WP_001331364 | Hok/Gef family protein | - |
| HVV54_RS23125 (HVV54_23125) | 69872..70123 | - | 252 | WP_001291965 | hypothetical protein | - |
| HVV54_RS24285 | 70624..70719 | + | 96 | WP_000609148 | DinQ-like type I toxin DqlB | - |
| HVV54_RS23135 (HVV54_23135) | 70784..70960 | - | 177 | WP_001054904 | hypothetical protein | - |
| HVV54_RS23140 (HVV54_23140) | 71352..71561 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| HVV54_RS23145 (HVV54_23145) | 71633..72295 | - | 663 | WP_000653334 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HVV54_RS23150 (HVV54_23150) | 72360..74522 | - | 2163 | WP_000698351 | DotA/TraY family protein | traY |
| HVV54_RS23155 (HVV54_23155) | 74619..75203 | - | 585 | WP_001037987 | IncI1-type conjugal transfer protein TraX | - |
| HVV54_RS23160 (HVV54_23160) | 75232..76434 | - | 1203 | WP_001189160 | IncI1-type conjugal transfer protein TraW | traW |
| HVV54_RS23165 (HVV54_23165) | 76401..77015 | - | 615 | WP_000337398 | IncI1-type conjugal transfer protein TraV | traV |
| HVV54_RS23170 (HVV54_23170) | 77015..80059 | - | 3045 | WP_001024780 | IncI1-type conjugal transfer protein TraU | traU |
| HVV54_RS23175 (HVV54_23175) | 80149..80949 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| HVV54_RS23180 (HVV54_23180) | 80933..81121 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| HVV54_RS23185 (HVV54_23185) | 81185..81589 | - | 405 | WP_000086957 | IncI1-type conjugal transfer protein TraR | traR |
| HVV54_RS23190 (HVV54_23190) | 81640..82167 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| HVV54_RS23195 (HVV54_23195) | 82167..82871 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| HVV54_RS23200 (HVV54_23200) | 82871..84160 | - | 1290 | WP_001272005 | conjugal transfer protein TraO | traO |
| HVV54_RS23205 (HVV54_23205) | 84163..85146 | - | 984 | WP_001191877 | IncI1-type conjugal transfer protein TraN | traN |
| HVV54_RS23210 (HVV54_23210) | 85157..85849 | - | 693 | WP_000138548 | DotI/IcmL family type IV secretion protein | traM |
| HVV54_RS23215 (HVV54_23215) | 85846..86193 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| HVV54_RS23220 (HVV54_23220) | 86211..89978 | - | 3768 | WP_001141529 | LPD7 domain-containing protein | - |
| HVV54_RS23225 (HVV54_23225) | 90068..90619 | - | 552 | WP_000014583 | phospholipase D family protein | - |
| HVV54_RS23230 (HVV54_23230) | 90634..90924 | - | 291 | WP_001299214 | hypothetical protein | traK |
| HVV54_RS23235 (HVV54_23235) | 90921..92069 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| HVV54_RS23240 (HVV54_23240) | 92066..92884 | - | 819 | WP_000646098 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| HVV54_RS23245 (HVV54_23245) | 92881..93339 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| HVV54_RS23250 (HVV54_23250) | 93734..94066 | - | 333 | Protein_111 | lipopolysaccharide core heptose(II)-phosphate phosphatase | - |
| HVV54_RS23255 (HVV54_23255) | 94158..95386 | + | 1229 | WP_164473239 | IS3-like element IS2 family transposase | - |
| HVV54_RS24200 | 95379..95654 | - | 276 | Protein_113 | histidine phosphatase family protein | - |
| HVV54_RS23260 (HVV54_23260) | 95714..96916 | - | 1203 | WP_000976351 | conjugal transfer protein TraF | - |
| HVV54_RS23265 (HVV54_23265) | 97001..97825 | - | 825 | WP_001238939 | conjugal transfer protein TraE | traE |
| HVV54_RS23270 (HVV54_23270) | 97976..99130 | - | 1155 | WP_001139957 | site-specific integrase | - |
| HVV54_RS23275 (HVV54_23275) | 99966..100172 | - | 207 | WP_000008649 | hypothetical protein | - |
| HVV54_RS23280 (HVV54_23280) | 100322..100570 | + | 249 | WP_001349157 | hypothetical protein | - |
| HVV54_RS23285 (HVV54_23285) | 100567..101859 | - | 1293 | WP_001417545 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| HVV54_RS23290 (HVV54_23290) | 101859..102515 | - | 657 | WP_001193553 | prepilin peptidase | - |
| HVV54_RS23295 (HVV54_23295) | 102500..103060 | - | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| HVV54_RS23300 (HVV54_23300) | 103070..103684 | - | 615 | WP_000959785 | type 4 pilus major pilin | - |
| HVV54_RS23305 (HVV54_23305) | 103702..104799 | - | 1098 | WP_001208805 | type II secretion system F family protein | - |
| HVV54_RS23310 (HVV54_23310) | 104812..106365 | - | 1554 | WP_000362202 | ATPase, T2SS/T4P/T4SS family | - |
| HVV54_RS23315 (HVV54_23315) | 106376..106828 | - | 453 | WP_001247336 | type IV pilus biogenesis protein PilP | - |
| HVV54_RS23320 (HVV54_23320) | 106815..108110 | - | 1296 | WP_000752774 | type 4b pilus protein PilO2 | - |
| HVV54_RS23325 (HVV54_23325) | 108103..109785 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| HVV54_RS23330 (HVV54_23330) | 109799..110236 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |