T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 100484..128844
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HW42_RS24670 (HW42_23995) | 96554..96991 | + | 438 | WP_000539684 | type IV pilus biogenesis protein PilM | - |
| HW42_RS24675 (HW42_24000) | 97022..98641 | + | 1620 | WP_001034998 | PilN family type IVB pilus formation outer membrane protein | - |
| HW42_RS24680 (HW42_24005) | 98662..99957 | + | 1296 | WP_033806466 | type 4b pilus protein PilO2 | - |
| HW42_RS24685 (HW42_24010) | 99947..100399 | + | 453 | WP_040116966 | type IV pilus biogenesis protein PilP | - |
| HW42_RS24690 (HW42_24015) | 100484..101992 | + | 1509 | WP_040116967 | ATPase, T2SS/T4P/T4SS family | virB11 |
| HW42_RS24695 (HW42_24020) | 101994..103094 | + | 1101 | WP_001563249 | type II secretion system F family protein | - |
| HW42_RS24700 (HW42_24025) | 103168..103704 | + | 537 | WP_001011156 | type 4 pilus major pilin | - |
| HW42_RS24705 (HW42_24030) | 103758..104231 | + | 474 | WP_000870986 | lytic transglycosylase domain-containing protein | virB1 |
| HW42_RS24710 (HW42_24035) | 104250..104885 | + | 636 | WP_040116968 | prepilin peptidase | - |
| HW42_RS24715 (HW42_24040) | 104890..106254 | + | 1365 | WP_021531785 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| HW42_RS28705 | 106512..106670 | + | 159 | Protein_122 | integrase | - |
| HW42_RS24720 (HW42_24055) | 106712..107002 | + | 291 | WP_000681898 | hypothetical protein | - |
| HW42_RS24725 (HW42_24060) | 107094..107414 | - | 321 | WP_000695052 | hypothetical protein | - |
| HW42_RS24730 (HW42_24065) | 107674..108495 | + | 822 | WP_000804089 | hypothetical protein | traE |
| HW42_RS24735 (HW42_24070) | 108585..109787 | + | 1203 | WP_000980151 | conjugal transfer protein TraF | - |
| HW42_RS28330 | 109927..110097 | + | 171 | WP_000482367 | hypothetical protein | - |
| HW42_RS24740 (HW42_24080) | 110146..110598 | + | 453 | WP_001081199 | DotD/TraH family lipoprotein | - |
| HW42_RS24745 (HW42_24085) | 110595..111431 | + | 837 | WP_040116969 | type IV secretory system conjugative DNA transfer family protein | traI |
| HW42_RS24750 (HW42_24090) | 111415..112563 | + | 1149 | WP_040116970 | plasmid transfer ATPase TraJ | virB11 |
| HW42_RS24755 (HW42_24095) | 112560..112850 | + | 291 | WP_040116971 | hypothetical protein | traK |
| HW42_RS24760 (HW42_24100) | 112914..116930 | + | 4017 | WP_040116972 | LPD7 domain-containing protein | - |
| HW42_RS24765 (HW42_24105) | 116947..117297 | + | 351 | WP_001056369 | hypothetical protein | traL |
| HW42_RS24770 (HW42_24110) | 117309..118004 | + | 696 | WP_001287261 | DotI/IcmL family type IV secretion protein | traM |
| HW42_RS24775 (HW42_24115) | 118015..118989 | + | 975 | WP_040116973 | DotH/IcmK family type IV secretion protein | traN |
| HW42_RS24780 (HW42_24120) | 118993..120324 | + | 1332 | WP_040116974 | conjugal transfer protein TraO | traO |
| HW42_RS24785 (HW42_24125) | 120321..121034 | + | 714 | WP_000787009 | conjugal transfer protein TraP | traP |
| HW42_RS24790 (HW42_24130) | 121031..121561 | + | 531 | WP_244462512 | conjugal transfer protein TraQ | traQ |
| HW42_RS24795 (HW42_24135) | 121608..122006 | + | 399 | WP_040116975 | DUF6750 family protein | traR |
| HW42_RS28820 (HW42_24140) | 122063..122314 | + | 252 | WP_001277575 | hypothetical protein | - |
| HW42_RS24805 (HW42_24145) | 122421..123047 | + | 627 | WP_000785707 | hypothetical protein | traT |
| HW42_RS24810 (HW42_24150) | 123102..123461 | + | 360 | WP_000380400 | hypothetical protein | - |
| HW42_RS24815 (HW42_24155) | 123461..123841 | + | 381 | WP_000690886 | hypothetical protein | - |
| HW42_RS24820 (HW42_24160) | 124017..127061 | + | 3045 | WP_032326940 | conjugal transfer protein | traU |
| HW42_RS24825 (HW42_24165) | 127061..127678 | + | 618 | WP_000286857 | hypothetical protein | traV |
| HW42_RS24830 (HW42_24170) | 127639..128844 | + | 1206 | WP_040116976 | conjugal transfer protein TraW | traW |
| HW42_RS24835 (HW42_24175) | 128841..129410 | + | 570 | WP_040116977 | conjugal transfer protein TraX | - |
| HW42_RS24840 | 129483..131039 | + | 1557 | Protein_148 | DotA/TraY family protein | - |
| HW42_RS24850 (HW42_24190) | 131104..132266 | + | 1163 | WP_085947598 | IS3-like element IS3 family transposase | - |
| HW42_RS24855 (HW42_24195) | 132298..132909 | + | 612 | Protein_150 | DotA/TraY family protein | - |
| HW42_RS24860 (HW42_24200) | 132980..133633 | + | 654 | WP_001098361 | plasmid IncI1-type surface exclusion protein ExcA | - |