T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 3653..39334
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D0377_RS00005 | 1..654 | - | 654 | Protein_0 | IncI1-type conjugal transfer protein TrbA | - |
| D0377_RS00010 (D0377_00001) | 946..1098 | + | 153 | WP_001331364 | Hok/Gef family protein | - |
| D0377_RS00015 (D0377_00002) | 1170..1421 | - | 252 | WP_001291964 | hypothetical protein | - |
| D0377_RS00670 | 1920..2015 | + | 96 | WP_001303310 | DinQ-like type I toxin DqlB | - |
| D0377_RS00020 | 2080..2364 | - | 285 | WP_031942457 | hypothetical protein | - |
| D0377_RS00025 (D0377_00004) | 2648..2857 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| D0377_RS00030 (D0377_00005) | 2929..3603 | - | 675 | WP_223866377 | plasmid IncI1-type surface exclusion protein ExcA | - |
| D0377_RS00035 (D0377_00006) | 3653..5821 | - | 2169 | WP_021537350 | DotA/TraY family protein | traY |
| D0377_RS00040 (D0377_00007) | 5918..6502 | - | 585 | WP_001037987 | IncI1-type conjugal transfer protein TraX | - |
| D0377_RS00045 (D0377_00008) | 6531..7733 | - | 1203 | WP_001189160 | IncI1-type conjugal transfer protein TraW | traW |
| D0377_RS00050 (D0377_00009) | 7700..8314 | - | 615 | WP_000337398 | IncI1-type conjugal transfer protein TraV | traV |
| D0377_RS00055 (D0377_00010) | 8314..11358 | - | 3045 | WP_021265678 | IncI1-type conjugal transfer protein TraU | traU |
| D0377_RS00060 (D0377_00011) | 11448..12248 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| D0377_RS00065 (D0377_00012) | 12232..12420 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| D0377_RS00070 (D0377_00013) | 12484..12888 | - | 405 | WP_000086958 | IncI1-type conjugal transfer protein TraR | traR |
| D0377_RS00075 (D0377_00014) | 12939..13466 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| D0377_RS00080 (D0377_00015) | 13466..14170 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| D0377_RS00085 (D0377_00016) | 14170..15459 | - | 1290 | WP_001272003 | conjugal transfer protein TraO | traO |
| D0377_RS00090 (D0377_00017) | 15462..16445 | - | 984 | WP_001191877 | IncI1-type conjugal transfer protein TraN | traN |
| D0377_RS00095 (D0377_00018) | 16456..17148 | - | 693 | WP_000138550 | DotI/IcmL family type IV secretion protein | traM |
| D0377_RS00100 (D0377_00019) | 17145..17492 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| D0377_RS00105 | 17510..21276 | - | 3767 | Protein_21 | LPD7 domain-containing protein | - |
| D0377_RS00110 (D0377_00022) | 21365..21916 | - | 552 | WP_000014583 | phospholipase D family protein | - |
| D0377_RS00115 (D0377_00023) | 21931..22221 | - | 291 | WP_001299214 | hypothetical protein | traK |
| D0377_RS00120 (D0377_00024) | 22218..23366 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| D0377_RS00125 (D0377_00025) | 23363..24181 | - | 819 | WP_000646098 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| D0377_RS00130 (D0377_00026) | 24178..24636 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| D0377_RS00135 (D0377_00027) | 25031..25615 | - | 585 | WP_000977522 | histidine phosphatase family protein | - |
| D0377_RS00140 (D0377_00028) | 25675..26877 | - | 1203 | WP_000976351 | conjugal transfer protein TraF | - |
| D0377_RS00145 (D0377_00029) | 26962..27786 | - | 825 | WP_001238939 | conjugal transfer protein TraE | traE |
| D0377_RS00150 (D0377_00030) | 27937..29091 | - | 1155 | WP_001139957 | site-specific integrase | - |
| D0377_RS00655 | 29075..29374 | + | 300 | WP_223873359 | pilus assembly protein PilV | - |
| D0377_RS00675 | 29644..29865 | + | 222 | Protein_32 | prepilin | - |
| D0377_RS00160 (D0377_00032) | 30467..31729 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| D0377_RS00165 (D0377_00033) | 32017..32892 | + | 876 | WP_013188473 | extended-spectrum class A beta-lactamase CTX-M-1 | - |
| D0377_RS00170 (D0377_00034) | 32939..33283 | - | 345 | Protein_35 | WbuC family cupin fold metalloprotein | - |
| D0377_RS00660 | 33283..33492 | + | 210 | Protein_36 | hypothetical protein | - |
| D0377_RS00175 (D0377_00035) | 33494..34828 | - | 1335 | WP_024132209 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| D0377_RS00180 (D0377_00036) | 34828..35484 | - | 657 | WP_001193553 | prepilin peptidase | - |
| D0377_RS00185 (D0377_00037) | 35469..36029 | - | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| D0377_RS00190 (D0377_00038) | 36039..36653 | - | 615 | WP_000959785 | type 4 pilus major pilin | - |
| D0377_RS00195 (D0377_00039) | 36671..37768 | - | 1098 | WP_001208805 | type II secretion system F family protein | - |
| D0377_RS00200 (D0377_00040) | 37781..39334 | - | 1554 | WP_000362202 | ATPase, T2SS/T4P/T4SS family | virB11 |
| D0377_RS00205 (D0377_00041) | 39345..39797 | - | 453 | WP_001247334 | type IV pilus biogenesis protein PilP | - |
| D0377_RS00210 (D0377_00042) | 39784..41079 | - | 1296 | WP_000752772 | type 4b pilus protein PilO2 | - |
| D0377_RS00215 (D0377_00043) | 41072..42754 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| D0377_RS00220 (D0377_00044) | 42768..43205 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| D0377_RS00225 (D0377_00045) | 43205..44272 | - | 1068 | WP_001302629 | type IV pilus biogenesis lipoprotein PilL | - |