T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 33598..54763
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PU992_RS30500 (PU992_30500) | 29385..30062 | + | 678 | WP_020323167 | DUF5417 domain-containing protein | - |
| PU992_RS30505 (PU992_30505) | 30244..30450 | + | 207 | WP_020323152 | DUF905 family protein | - |
| PU992_RS30510 (PU992_30510) | 30524..30706 | + | 183 | WP_000170167 | hypothetical protein | - |
| PU992_RS30515 (PU992_30515) | 30765..31115 | - | 351 | WP_223226687 | hypothetical protein | - |
| PU992_RS30520 (PU992_30520) | 31179..31547 | - | 369 | WP_032416596 | plasmid stabilization protein StbC | - |
| PU992_RS30525 (PU992_30525) | 31550..32266 | - | 717 | WP_020323147 | StbB family protein | - |
| PU992_RS30530 (PU992_30530) | 32275..32706 | - | 432 | WP_020323173 | plasmid stabilization protein StbA | - |
| PU992_RS30535 (PU992_30535) | 33173..33598 | + | 426 | WP_223831802 | traK protein | - |
| PU992_RS30540 (PU992_30540) | 33598..35130 | + | 1533 | WP_020323171 | type IV secretion system DNA-binding domain-containing protein | virb4 |
| PU992_RS30545 (PU992_30545) | 35135..38353 | + | 3219 | WP_020323154 | MobF family relaxase | - |
| PU992_RS30550 (PU992_30550) | 38350..39015 | + | 666 | WP_020323157 | DUF6710 family protein | - |
| PU992_RS30555 (PU992_30555) | 39008..39370 | + | 363 | WP_020323170 | hypothetical protein | - |
| PU992_RS30560 (PU992_30560) | 39986..40297 | - | 312 | WP_032416518 | hypothetical protein | - |
| PU992_RS30565 (PU992_30565) | 40294..40761 | - | 468 | WP_046092601 | phospholipase D family protein | - |
| PU992_RS30570 (PU992_30570) | 40818..41819 | - | 1002 | WP_020323165 | ATPase, T2SS/T4P/T4SS family | virB11 |
| PU992_RS30575 (PU992_30575) | 41870..42697 | - | 828 | WP_228702684 | type IV secretion system protein VirB10 | virB10 |
| PU992_RS30580 (PU992_30580) | 42772..43377 | - | 606 | WP_000509966 | recombinase family protein | - |
| PU992_RS30585 (PU992_30585) | 43472..46369 | + | 2898 | WP_001553819 | Tn3-like element Tn5403 family transposase | - |
| PU992_RS30590 (PU992_30590) | 46385..46672 | - | 288 | WP_274342522 | hypothetical protein | - |
| PU992_RS30595 (PU992_30595) | 46672..47559 | - | 888 | WP_020323166 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| PU992_RS30600 (PU992_30600) | 47570..48265 | - | 696 | WP_001208352 | type IV secretion system protein | virB8 |
| PU992_RS30885 | 48276..48407 | - | 132 | WP_032493177 | hypothetical protein | - |
| PU992_RS30605 (PU992_30605) | 48484..49521 | - | 1038 | WP_020323169 | type IV secretion system protein | virB6 |
| PU992_RS30610 (PU992_30610) | 49538..49780 | - | 243 | WP_000858958 | EexN family lipoprotein | - |
| PU992_RS30615 (PU992_30615) | 49790..50491 | - | 702 | WP_020323143 | type IV secretion system protein | virB5 |
| PU992_RS30620 (PU992_30620) | 50507..53080 | - | 2574 | WP_020323176 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| PU992_RS30625 (PU992_30625) | 53081..53398 | - | 318 | WP_000462629 | VirB3 family type IV secretion system protein | virB3 |
| PU992_RS30630 (PU992_30630) | 53438..53779 | - | 342 | WP_001121032 | TrbC/VirB2 family protein | virB2 |
| PU992_RS30635 (PU992_30635) | 53981..54763 | - | 783 | WP_032416587 | lytic transglycosylase domain-containing protein | virB1 |
| PU992_RS30640 (PU992_30640) | 54863..55180 | + | 318 | WP_032449361 | H-NS histone family protein | - |
| PU992_RS30645 (PU992_30645) | 55184..55534 | + | 351 | WP_032416642 | hypothetical protein | - |
| PU992_RS30650 (PU992_30650) | 55531..55869 | + | 339 | WP_223226685 | hypothetical protein | - |
| PU992_RS30655 (PU992_30655) | 55873..56181 | + | 309 | WP_032416643 | hypothetical protein | - |
| PU992_RS30660 (PU992_30660) | 56466..56651 | + | 186 | WP_006118530 | ribbon-helix-helix domain-containing protein | - |
| PU992_RS30665 (PU992_30665) | 56648..57256 | - | 609 | WP_032449362 | recombinase family protein | - |
| PU992_RS30670 (PU992_30670) | 57422..57754 | - | 333 | WP_020323168 | hypothetical protein | - |