T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 31343..59432
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PTC90_RS31500 (PTC90_31495) | 26525..26872 | + | 348 | WP_273863580 | hypothetical protein | - |
| PTC90_RS31505 (PTC90_31500) | 26965..27111 | + | 147 | WP_022644943 | hypothetical protein | - |
| PTC90_RS31510 (PTC90_31505) | 27159..27395 | + | 237 | Protein_39 | SAM-dependent DNA methyltransferase | - |
| PTC90_RS31515 (PTC90_31510) | 27369..27551 | - | 183 | WP_071562612 | hypothetical protein | - |
| PTC90_RS31520 (PTC90_31515) | 27744..28286 | + | 543 | WP_022644941 | antirestriction protein | - |
| PTC90_RS31525 (PTC90_31520) | 28310..28792 | - | 483 | WP_022644940 | transglycosylase SLT domain-containing protein | - |
| PTC90_RS31530 (PTC90_31525) | 29237..29629 | + | 393 | WP_020804860 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PTC90_RS31535 (PTC90_31530) | 29867..30559 | + | 693 | WP_032426082 | conjugal transfer protein TrbJ | - |
| PTC90_RS31540 (PTC90_31535) | 30734..30898 | + | 165 | WP_032426810 | TraY domain-containing protein | - |
| PTC90_RS31545 (PTC90_31540) | 30961..31329 | + | 369 | WP_040118418 | type IV conjugative transfer system pilin TraA | - |
| PTC90_RS31550 (PTC90_31545) | 31343..31648 | + | 306 | WP_020323523 | type IV conjugative transfer system protein TraL | traL |
| PTC90_RS31555 (PTC90_31550) | 31668..32234 | + | 567 | WP_040118472 | type IV conjugative transfer system protein TraE | traE |
| PTC90_RS31560 (PTC90_31555) | 32221..32961 | + | 741 | WP_040118473 | type-F conjugative transfer system secretin TraK | traK |
| PTC90_RS31565 (PTC90_31560) | 32961..34376 | + | 1416 | WP_040118474 | F-type conjugal transfer pilus assembly protein TraB | traB |
| PTC90_RS31570 (PTC90_31565) | 34369..34965 | + | 597 | WP_117146400 | conjugal transfer protein TraP | - |
| PTC90_RS31575 (PTC90_31570) | 35205..35786 | + | 582 | WP_040118475 | type IV conjugative transfer system lipoprotein TraV | traV |
| PTC90_RS31580 (PTC90_31575) | 35933..36136 | + | 204 | WP_020315141 | hypothetical protein | - |
| PTC90_RS31585 (PTC90_31580) | 36377..36790 | + | 414 | WP_040118476 | hypothetical protein | - |
| PTC90_RS31590 (PTC90_31585) | 36819..37118 | + | 300 | WP_040118477 | hypothetical protein | - |
| PTC90_RS31595 (PTC90_31590) | 37135..37359 | + | 225 | WP_040118478 | hypothetical protein | - |
| PTC90_RS31600 (PTC90_31595) | 37356..37760 | + | 405 | WP_040118479 | hypothetical protein | - |
| PTC90_RS31605 (PTC90_31600) | 37893..40532 | + | 2640 | WP_040118480 | type IV secretion system protein TraC | virb4 |
| PTC90_RS31610 (PTC90_31605) | 40565..40966 | + | 402 | WP_051800694 | type-F conjugative transfer system protein TrbI | - |
| PTC90_RS31615 (PTC90_31610) | 40963..41589 | + | 627 | WP_040118481 | type-F conjugative transfer system protein TraW | traW |
| PTC90_RS31620 (PTC90_31615) | 41609..42592 | + | 984 | WP_273863590 | conjugal transfer pilus assembly protein TraU | traU |
| PTC90_RS31625 (PTC90_31620) | 42607..43155 | + | 549 | WP_022631518 | hypothetical protein | - |
| PTC90_RS31630 (PTC90_31625) | 43876..44478 | + | 603 | WP_022631520 | hypothetical protein | - |
| PTC90_RS31635 (PTC90_31630) | 44623..45270 | + | 648 | WP_273863541 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| PTC90_RS31640 (PTC90_31635) | 45329..47284 | + | 1956 | WP_020803160 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| PTC90_RS31645 (PTC90_31640) | 47317..47598 | + | 282 | WP_032419932 | hypothetical protein | - |
| PTC90_RS31650 (PTC90_31645) | 47588..47815 | + | 228 | WP_012540032 | conjugal transfer protein TrbE | - |
| PTC90_RS31655 (PTC90_31650) | 47826..48152 | + | 327 | WP_020323521 | hypothetical protein | - |
| PTC90_RS31660 (PTC90_31655) | 48173..48925 | + | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| PTC90_RS31665 (PTC90_31660) | 48936..49175 | + | 240 | WP_009309875 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PTC90_RS31670 (PTC90_31665) | 49147..49719 | + | 573 | WP_009309876 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| PTC90_RS31675 (PTC90_31670) | 49712..50140 | + | 429 | WP_004152689 | hypothetical protein | - |
| PTC90_RS31680 (PTC90_31675) | 50127..51497 | + | 1371 | WP_009309877 | conjugal transfer pilus assembly protein TraH | traH |
| PTC90_RS31685 (PTC90_31680) | 51497..54370 | + | 2874 | WP_009309878 | conjugal transfer mating-pair stabilization protein TraG | traG |
| PTC90_RS31690 (PTC90_31685) | 55030..56010 | + | 981 | WP_000019445 | IS5-like element ISKpn26 family transposase | - |
| PTC90_RS32910 | 55992..56207 | + | 216 | WP_337961636 | hypothetical protein | - |
| PTC90_RS31695 (PTC90_31690) | 56305..56997 | + | 693 | WP_009309879 | hypothetical protein | - |
| PTC90_RS31700 (PTC90_31695) | 57123..59432 | + | 2310 | WP_009309880 | type IV conjugative transfer system coupling protein TraD | virb4 |