T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 12320..51567
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL420_RS00050 (NL420_000050) | 7401..8451 | + | 1051 | Protein_10 | type IV pilus biogenesis lipoprotein PilL | - |
| NL420_RS00055 (NL420_000055) | 8451..8888 | + | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| NL420_RS00060 (NL420_000060) | 8902..10583 | + | 1682 | Protein_12 | PilN family type IVB pilus formation outer membrane protein | - |
| NL420_RS00065 (NL420_000065) | 10576..11870 | + | 1295 | Protein_13 | type 4b pilus protein PilO2 | - |
| NL420_RS00070 (NL420_000070) | 11857..12309 | + | 453 | WP_001247336 | type IV pilus biogenesis protein PilP | - |
| NL420_RS00075 (NL420_000075) | 12320..13873 | + | 1554 | WP_000362202 | ATPase, T2SS/T4P/T4SS family | virB11 |
| NL420_RS00080 (NL420_000080) | 13886..14982 | + | 1097 | Protein_16 | type II secretion system F family protein | - |
| NL420_RS00085 (NL420_000085) | 15000..15614 | + | 615 | WP_000959785 | type 4 pilus major pilin | - |
| NL420_RS00090 (NL420_000090) | 15719..16183 | + | 465 | WP_042004728 | lytic transglycosylase domain-containing protein | virB1 |
| NL420_RS00095 (NL420_000095) | 16168..16824 | + | 657 | WP_001193553 | prepilin peptidase | - |
| NL420_RS00100 (NL420_000100) | 16824..18110 | + | 1287 | WP_336426530 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| NL420_RS00105 (NL420_000105) | 19289..19642 | - | 354 | WP_001393368 | hypothetical protein | - |
| NL420_RS00110 (NL420_000110) | 19641..20794 | + | 1154 | Protein_22 | site-specific integrase | - |
| NL420_RS00115 (NL420_000115) | 20945..21769 | + | 825 | WP_001238939 | conjugal transfer protein TraE | traE |
| NL420_RS00120 (NL420_000120) | 21854..23056 | + | 1203 | WP_000976351 | conjugal transfer protein TraF | - |
| NL420_RS00125 (NL420_000125) | 23116..23700 | + | 585 | WP_000977522 | histidine phosphatase family protein | - |
| NL420_RS00130 (NL420_000130) | 24095..24553 | + | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| NL420_RS00135 (NL420_000135) | 24550..25368 | + | 819 | WP_031942450 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| NL420_RS00140 (NL420_000140) | 25365..26513 | + | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| NL420_RS00145 (NL420_000145) | 26510..26800 | + | 291 | WP_001314267 | hypothetical protein | traK |
| NL420_RS00150 (NL420_000150) | 26815..27366 | + | 552 | WP_000014586 | phospholipase D family protein | - |
| NL420_RS00155 (NL420_000155) | 27455..31216 | + | 3762 | Protein_31 | LPD7 domain-containing protein | - |
| NL420_RS00160 (NL420_000160) | 31234..31581 | + | 348 | WP_001055900 | conjugal transfer protein | traL |
| NL420_RS00165 (NL420_000165) | 31578..32270 | + | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| NL420_RS00170 (NL420_000170) | 32281..33264 | + | 984 | WP_001191879 | IncI1-type conjugal transfer protein TraN | traN |
| NL420_RS00175 (NL420_000175) | 33267..34556 | + | 1290 | WP_001271994 | conjugal transfer protein TraO | traO |
| NL420_RS00180 (NL420_000180) | 34556..35260 | + | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| NL420_RS00185 (NL420_000185) | 35260..35787 | + | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| NL420_RS00190 (NL420_000190) | 35837..36239 | + | 403 | Protein_38 | IncI1-type conjugal transfer protein TraR | - |
| NL420_RS00195 (NL420_000195) | 36303..36491 | + | 189 | WP_001277253 | putative conjugal transfer protein TraS | - |
| NL420_RS00200 (NL420_000200) | 36475..37274 | + | 800 | Protein_40 | IncI1-type conjugal transfer protein TraT | - |
| NL420_RS00205 (NL420_000205) | 37364..40407 | + | 3044 | Protein_41 | IncI1-type conjugal transfer protein TraU | - |
| NL420_RS00210 (NL420_000210) | 40407..41021 | + | 615 | WP_031942449 | IncI1-type conjugal transfer protein TraV | traV |
| NL420_RS00215 (NL420_000215) | 40988..42190 | + | 1203 | WP_031942448 | IncI1-type conjugal transfer protein TraW | traW |
| NL420_RS00220 (NL420_000220) | 42219..42803 | + | 585 | WP_001037987 | IncI1-type conjugal transfer protein TraX | - |
| NL420_RS00225 (NL420_000225) | 42900..45067 | + | 2168 | Protein_45 | IncI1-type conjugal transfer membrane protein TraY | - |
| NL420_RS00230 (NL420_000230) | 45143..45757 | + | 615 | WP_000578648 | plasmid IncI1-type surface exclusion protein ExcA | - |
| NL420_RS00235 (NL420_000235) | 45855..46064 | + | 210 | WP_001140543 | hemolysin expression modulator Hha | - |
| NL420_RS00240 (NL420_000240) | 46247..46423 | + | 177 | WP_001054898 | hypothetical protein | - |
| NL420_RS00245 (NL420_000245) | 46488..46583 | - | 96 | WP_000609148 | DinQ-like type I toxin DqlB | - |
| NL420_RS00250 (NL420_000250) | 47084..47335 | + | 252 | WP_001291964 | hypothetical protein | - |
| NL420_RS00255 (NL420_000255) | 47407..47559 | - | 153 | WP_001331364 | Hok/Gef family protein | - |
| NL420_RS00260 (NL420_000260) | 48186..48964 | + | 779 | Protein_52 | protein FinQ | - |
| NL420_RS00265 (NL420_000265) | 49270..50478 | + | 1209 | WP_001703845 | IncI1-type conjugal transfer protein TrbA | trbA |
| NL420_RS00270 (NL420_000270) | 50497..51567 | + | 1071 | WP_031942445 | IncI1-type conjugal transfer protein TrbB | trbB |
| NL420_RS00275 (NL420_000275) | 51560..53850 | + | 2291 | Protein_55 | F-type conjugative transfer protein TrbC | - |