T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 62926..91399
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTG50_RS00375 | 57951..58301 | + | 351 | WP_023287104 | hypothetical protein | - |
| HTG50_RS00380 | 58933..59289 | + | 357 | WP_019706019 | hypothetical protein | - |
| HTG50_RS00385 | 59350..59562 | + | 213 | WP_019706020 | hypothetical protein | - |
| HTG50_RS00390 | 59573..59797 | + | 225 | WP_014343499 | hypothetical protein | - |
| HTG50_RS00395 | 59878..60198 | + | 321 | WP_004152720 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HTG50_RS00400 | 60188..60466 | + | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| HTG50_RS00405 | 60467..60880 | + | 414 | WP_069985713 | helix-turn-helix domain-containing protein | - |
| HTG50_RS00410 | 61710..62531 | + | 822 | WP_023287138 | DUF932 domain-containing protein | - |
| HTG50_RS00415 | 62564..62893 | + | 330 | WP_071994324 | DUF5983 family protein | - |
| HTG50_RS00420 | 62926..63411 | - | 486 | WP_032440470 | transglycosylase SLT domain-containing protein | virB1 |
| HTG50_RS00425 | 63843..64235 | + | 393 | WP_004194114 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HTG50_RS00430 | 64465..65166 | + | 702 | WP_004194113 | hypothetical protein | - |
| HTG50_RS00435 | 65252..65452 | + | 201 | WP_004194116 | TraY domain-containing protein | - |
| HTG50_RS00440 | 65521..65889 | + | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| HTG50_RS00445 | 65903..66208 | + | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| HTG50_RS00450 | 66228..66794 | + | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| HTG50_RS00455 | 66781..67521 | + | 741 | WP_013023821 | type-F conjugative transfer system secretin TraK | traK |
| HTG50_RS00460 | 67521..68945 | + | 1425 | WP_004194260 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HTG50_RS00465 | 69018..69602 | + | 585 | WP_032440547 | type IV conjugative transfer system lipoprotein TraV | traV |
| HTG50_RS00470 | 69925..70143 | + | 219 | WP_004195468 | hypothetical protein | - |
| HTG50_RS00475 | 70144..70455 | + | 312 | WP_029497417 | hypothetical protein | - |
| HTG50_RS00480 | 70522..70926 | + | 405 | WP_004197817 | hypothetical protein | - |
| HTG50_RS00485 | 71305..71703 | + | 399 | WP_023179972 | hypothetical protein | - |
| HTG50_RS00490 | 71775..74414 | + | 2640 | WP_013214024 | type IV secretion system protein TraC | virb4 |
| HTG50_RS00495 | 74414..74803 | + | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| HTG50_RS00500 | 74803..75438 | + | 636 | WP_029497419 | type-F conjugative transfer system protein TraW | traW |
| HTG50_RS00505 | 75473..75874 | + | 402 | WP_004194979 | hypothetical protein | - |
| HTG50_RS00510 | 75871..76860 | + | 990 | WP_029497420 | conjugal transfer pilus assembly protein TraU | traU |
| HTG50_RS00515 | 76873..77511 | + | 639 | WP_069985712 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HTG50_RS00520 | 77570..79525 | + | 1956 | WP_030003482 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HTG50_RS00525 | 79557..79811 | + | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| HTG50_RS00530 | 79789..80037 | + | 249 | WP_004152675 | hypothetical protein | - |
| HTG50_RS00535 | 80050..80376 | + | 327 | WP_004152676 | hypothetical protein | - |
| HTG50_RS00540 | 80397..81149 | + | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HTG50_RS00545 | 81160..81399 | + | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HTG50_RS00550 | 81371..81928 | + | 558 | WP_013214031 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HTG50_RS00555 | 81974..82417 | + | 444 | WP_004194305 | F-type conjugal transfer protein TrbF | - |
| HTG50_RS00560 | 82395..83774 | + | 1380 | WP_014343487 | conjugal transfer pilus assembly protein TraH | traH |
| HTG50_RS00565 | 83774..86623 | + | 2850 | WP_013609534 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HTG50_RS00570 | 86626..87159 | + | 534 | WP_014343486 | conjugal transfer protein TraS | - |
| HTG50_RS00575 | 87345..88076 | + | 732 | WP_004152629 | conjugal transfer complement resistance protein TraT | - |
| HTG50_RS00580 | 88269..88958 | + | 690 | WP_072101983 | hypothetical protein | - |
| HTG50_RS00585 | 89087..91399 | + | 2313 | WP_072101984 | type IV conjugative transfer system coupling protein TraD | virb4 |