T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 39417..58187
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ICESupCHN110003_032 | 36269..37123 | + | 855 | AVR65398 | mrr restriction system protein | - |
| ICESupCHN110003_033 | 37218..39368 | + | 2151 | AVR65399 | conjugative transfer protein TraI, relaxase | - |
| ICESupCHN110003_034 | 39417..41237 | + | 1821 | AVR65400 | IncF plasmid conjugative transfer protein TraD | virb4 |
| ICESupCHN110003_035 | 41247..41807 | + | 561 | AVR65401 | conjugative transfer protein 234 | - |
| ICESupCHN110003_036 | 41794..42429 | + | 636 | AVR65402 | conjugative transfer protein s043 | tfc7 |
| ICESupCHN110003_037 | 42456..43043 | - | 588 | AVR65403 | hypothetical protein | - |
| ICESupCHN110003_038 | 43332..43613 | + | 282 | AVR65404 | IncF plasmid conjugative transfer pilus assembly protein TraL | traL |
| ICESupCHN110003_039 | 43610..44236 | + | 627 | AVR65405 | IncF plasmid conjugative transfer pilus assembly protein TraE | traE |
| ICESupCHN110003_040 | 44220..45116 | + | 897 | AVR65406 | IncF plasmid conjugative transfer pilus assembly protein TraK | traK |
| ICESupCHN110003_041 | 45119..46408 | + | 1290 | AVR65407 | IncF plasmid conjugative transfer pilus assembly protein TraB | traB |
| ICESupCHN110003_042 | 46405..47055 | + | 651 | AVR65408 | conjugative transfer protein TraV | traV |
| ICESupCHN110003_043 | 47052..47426 | + | 375 | AVR65409 | conjugative transfer protein TraA | - |
| ICESupCHN110003_044 | 47502..48230 | + | 729 | AVR65410 | hypothetical protein | - |
| ICESupCHN110003_045 | 48418..49110 | + | 693 | AVR65411 | thiol:disulfide involved in conjugative transfer | trbB |
| ICESupCHN110003_046 | 49110..51509 | + | 2400 | AVR65412 | IncF plasmid conjugative transfer pilus assembly protein TraC | virb4 |
| ICESupCHN110003_047 | 51502..51849 | + | 348 | AVR65413 | conjugative transfer protein 345 | - |
| ICESupCHN110003_048 | 51833..52345 | + | 513 | AVR65414 | conjugative signal peptidase TrhF | - |
| ICESupCHN110003_049 | 52356..53480 | + | 1125 | AVR65415 | IncF plasmid conjugative transfer pilus assembly protein TraW | traW |
| ICESupCHN110003_050 | 53512..54492 | + | 981 | AVR65416 | IncF plasmid conjugative transfer pilus assembly protein TraU | traU |
| ICESupCHN110003_051 | 54495..58187 | + | 3693 | AVR65417 | IncF plasmid conjugative transfer protein TraN | traN |
| ICESupCHN110003_052 | 58610..60310 | + | 1701 | AVR65418 | putative ATP-dependent endonuclease of the OLD family | - |
| ICESupCHN110003_053 | 60312..61946 | + | 1635 | AVR65419 | ATP-dependent DNA helicase UvrD/PcrA | - |
| ICESupCHN110003_054 | 62141..62824 | - | 684 | AVR65420 | endonuclease I precursor | - |