T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 139785..168855
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FR848_RS28690 (FR848_28700) | 139785..142115 | - | 2331 | WP_040118437 | type IV conjugative transfer system coupling protein TraD | virb4 |
| FR848_RS28695 (FR848_28705) | 142309..143040 | - | 732 | WP_032716670 | conjugal transfer complement resistance protein TraT | - |
| FR848_RS28700 (FR848_28710) | 143235..143849 | - | 615 | WP_032732092 | hypothetical protein | - |
| FR848_RS28705 (FR848_28715) | 143875..146697 | - | 2823 | WP_040118409 | conjugal transfer mating-pair stabilization protein TraG | traG |
| FR848_RS28710 (FR848_28720) | 146697..148067 | - | 1371 | WP_032700807 | conjugal transfer pilus assembly protein TraH | traH |
| FR848_RS28715 (FR848_28725) | 148054..148482 | - | 429 | WP_032700808 | conjugal transfer protein TrbF | - |
| FR848_RS28720 (FR848_28730) | 148475..149041 | - | 567 | WP_032732090 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| FR848_RS28725 (FR848_28735) | 149016..149252 | - | 237 | WP_032700810 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FR848_RS28730 (FR848_28740) | 149263..150015 | - | 753 | WP_040118410 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| FR848_RS28735 (FR848_28745) | 150038..150364 | - | 327 | WP_032700812 | hypothetical protein | - |
| FR848_RS28745 (FR848_28755) | 150654..151622 | - | 969 | WP_077255412 | IS5 family transposase | - |
| FR848_RS28750 (FR848_28760) | 151702..153657 | - | 1956 | WP_040118411 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| FR848_RS28755 (FR848_28765) | 153657..154286 | - | 630 | WP_032700817 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| FR848_RS28760 (FR848_28770) | 154299..155258 | - | 960 | WP_032716690 | conjugal transfer pilus assembly protein TraU | traU |
| FR848_RS28765 (FR848_28775) | 155299..155928 | - | 630 | WP_032716660 | type-F conjugative transfer system protein TraW | traW |
| FR848_RS28770 (FR848_28780) | 155925..156317 | - | 393 | WP_032716659 | type-F conjugative transfer system protein TrbI | - |
| FR848_RS28775 (FR848_28785) | 156317..158956 | - | 2640 | WP_032716658 | type IV secretion system protein TraC | virb4 |
| FR848_RS28780 (FR848_28790) | 159036..159425 | - | 390 | WP_040118412 | hypothetical protein | - |
| FR848_RS28790 (FR848_28800) | 159802..160206 | - | 405 | WP_040118414 | hypothetical protein | - |
| FR848_RS28795 (FR848_28805) | 160203..160424 | - | 222 | WP_032732073 | hypothetical protein | - |
| FR848_RS30975 | 160906..161385 | - | 480 | WP_223306708 | hypothetical protein | - |
| FR848_RS28805 (FR848_28815) | 161492..162061 | - | 570 | WP_071889124 | type IV conjugative transfer system lipoprotein TraV | traV |
| FR848_RS28810 (FR848_28820) | 162080..162286 | - | 207 | WP_032700826 | hypothetical protein | - |
| FR848_RS28815 (FR848_28825) | 162267..162863 | - | 597 | WP_119834738 | conjugal transfer protein TraP | - |
| FR848_RS28820 (FR848_28830) | 162856..164274 | - | 1419 | WP_040118415 | F-type conjugal transfer pilus assembly protein TraB | traB |
| FR848_RS28825 (FR848_28835) | 164274..165008 | - | 735 | WP_040118416 | type-F conjugative transfer system secretin TraK | traK |
| FR848_RS28830 (FR848_28840) | 164995..165561 | - | 567 | WP_040118417 | type IV conjugative transfer system protein TraE | traE |
| FR848_RS28835 (FR848_28845) | 165581..165886 | - | 306 | WP_020323523 | type IV conjugative transfer system protein TraL | traL |
| FR848_RS28840 (FR848_28850) | 165900..166268 | - | 369 | WP_047665734 | type IV conjugative transfer system pilin TraA | - |
| FR848_RS28845 (FR848_28855) | 166330..166494 | - | 165 | WP_032444506 | TraY domain-containing protein | - |
| FR848_RS28850 (FR848_28860) | 166672..167361 | - | 690 | WP_071889125 | hypothetical protein | - |
| FR848_RS28855 (FR848_28865) | 167562..167951 | - | 390 | WP_032700831 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| FR848_RS28860 (FR848_28870) | 168376..168855 | + | 480 | WP_032716648 | transglycosylase SLT domain-containing protein | virB1 |
| FR848_RS28865 (FR848_28875) | 168893..169423 | - | 531 | WP_032716647 | antirestriction protein | - |
| FR848_RS28870 (FR848_28880) | 170108..170254 | - | 147 | WP_032700834 | hypothetical protein | - |
| FR848_RS28875 (FR848_28885) | 170348..170695 | - | 348 | WP_032700835 | hypothetical protein | - |
| FR848_RS28880 (FR848_28890) | 170721..170879 | - | 159 | WP_162180130 | hypothetical protein | - |
| FR848_RS28885 (FR848_28895) | 170936..171211 | - | 276 | WP_032700867 | hypothetical protein | - |
| FR848_RS28900 (FR848_28910) | 172030..172311 | - | 282 | WP_004118961 | helix-turn-helix transcriptional regulator | - |
| FR848_RS28905 (FR848_28915) | 172292..172621 | - | 330 | WP_004118963 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| FR848_RS30980 | 172941..173028 | - | 88 | Protein_182 | theronine dehydrogenase | - |
| FR848_RS28915 (FR848_28925) | 173025..173753 | - | 729 | WP_004118966 | plasmid SOS inhibition protein A | - |