T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 43526..73232
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F1E42_RS22020 (F1E42_22255) | 41242..43533 | - | 2292 | WP_001289271 | F-type conjugative transfer protein TrbC | - |
| F1E42_RS22025 (F1E42_22260) | 43526..44596 | - | 1071 | WP_000151575 | IncI1-type conjugal transfer protein TrbB | trbB |
| F1E42_RS22030 (F1E42_22265) | 44615..45823 | - | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| F1E42_RS22035 (F1E42_22270) | 46115..46267 | + | 153 | WP_001303307 | Hok/Gef family protein | - |
| F1E42_RS22040 (F1E42_22275) | 46339..46590 | - | 252 | WP_001291965 | hypothetical protein | - |
| F1E42_RS23235 | 47514..47690 | - | 177 | WP_001054900 | hypothetical protein | - |
| F1E42_RS22045 (F1E42_22290) | 48082..48291 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| F1E42_RS22050 (F1E42_22295) | 48363..49025 | - | 663 | WP_000644794 | plasmid IncI1-type surface exclusion protein ExcA | - |
| F1E42_RS22055 (F1E42_22300) | 49096..51264 | - | 2169 | WP_000698368 | DotA/TraY family protein | traY |
| F1E42_RS22060 (F1E42_22305) | 51361..51945 | - | 585 | WP_001037998 | conjugal transfer protein TraX | - |
| F1E42_RS22065 (F1E42_22310) | 51974..53176 | - | 1203 | WP_001189158 | IncI1-type conjugal transfer protein TraW | traW |
| F1E42_RS22070 (F1E42_22315) | 53143..53757 | - | 615 | WP_000337394 | IncI1-type conjugal transfer protein TraV | traV |
| F1E42_RS22075 (F1E42_22320) | 53757..56801 | - | 3045 | WP_001024752 | IncI1-type conjugal transfer protein TraU | traU |
| F1E42_RS22080 (F1E42_22325) | 56891..57691 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| F1E42_RS22085 (F1E42_22330) | 57675..57863 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| F1E42_RS22090 (F1E42_22335) | 57927..58331 | - | 405 | WP_000086960 | IncI1-type conjugal transfer protein TraR | traR |
| F1E42_RS22095 (F1E42_22340) | 58382..58909 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| F1E42_RS22100 (F1E42_22345) | 58909..59613 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| F1E42_RS22105 (F1E42_22350) | 59613..60902 | - | 1290 | WP_001271997 | conjugal transfer protein TraO | traO |
| F1E42_RS22110 (F1E42_22355) | 60905..61888 | - | 984 | WP_001191878 | IncI1-type conjugal transfer protein TraN | traN |
| F1E42_RS22115 (F1E42_22360) | 61899..62591 | - | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| F1E42_RS22120 (F1E42_22365) | 62588..62935 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| F1E42_RS22125 (F1E42_22370) | 62953..66720 | - | 3768 | WP_001141535 | LPD7 domain-containing protein | - |
| F1E42_RS22130 (F1E42_22375) | 66810..67361 | - | 552 | WP_000014584 | phospholipase D family protein | - |
| F1E42_RS22135 (F1E42_22380) | 67376..67666 | - | 291 | WP_001299214 | hypothetical protein | traK |
| F1E42_RS22140 (F1E42_22385) | 67663..68811 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| F1E42_RS22145 (F1E42_22390) | 68808..69626 | - | 819 | WP_130570434 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| F1E42_RS22150 (F1E42_22395) | 69623..70081 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| F1E42_RS22155 (F1E42_22400) | 70476..71060 | - | 585 | WP_000977517 | histidine phosphatase family protein | - |
| F1E42_RS22160 (F1E42_22405) | 71120..72322 | - | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| F1E42_RS22165 (F1E42_22410) | 72408..73232 | - | 825 | WP_001238927 | conjugal transfer protein TraE | traE |
| F1E42_RS22170 (F1E42_22415) | 73383..74537 | - | 1155 | WP_001139958 | site-specific integrase | - |
| F1E42_RS23635 | 74855..75140 | - | 286 | Protein_82 | Shufflon protein B | - |